Gene : Phvul.006G105600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12596:SF1 - EXPORTIN-4 Genomic Order:  1049
Name:  ? Phvul.006G105600 Secondary Identifier:  ? PAC:37173418
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G105600 0.5kb upstream 0.5kb upstream 31124 true Chr06: 21480161-21511284 Phaseolus vulgaris
Phvul.006G105600 0.5kb upstream 0.5kb upstream 500 false Chr06: 21510785-21511284 Phaseolus vulgaris
Phvul.006G105600 0.5kb downstream 0.5kb downstream 31124 true Chr06: 21479661-21510784 Phaseolus vulgaris
Phvul.006G105600 0.5kb downstream 0.5kb downstream 500 false Chr06: 21479661-21480160 Phaseolus vulgaris
Phvul.006G105600 1.0kb upstream 1.0kb upstream 31624 true Chr06: 21480161-21511784 Phaseolus vulgaris
Phvul.006G105600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21510785-21511784 Phaseolus vulgaris
Phvul.006G105600 1.0kb downstream 1.0kb downstream 31624 true Chr06: 21479161-21510784 Phaseolus vulgaris
Phvul.006G105600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21479161-21480160 Phaseolus vulgaris
Phvul.006G105600 2.0kb upstream 2.0kb upstream 32624 true Chr06: 21480161-21512784 Phaseolus vulgaris
Phvul.006G105600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21510785-21512784 Phaseolus vulgaris
Phvul.006G105600 2.0kb downstream 2.0kb downstream 32624 true Chr06: 21478161-21510784 Phaseolus vulgaris
Phvul.006G105600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21478161-21480160 Phaseolus vulgaris
Phvul.006G105600 5.0kb upstream 5.0kb upstream 35624 true Chr06: 21480161-21515784 Phaseolus vulgaris
Phvul.006G105600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21510785-21515784 Phaseolus vulgaris
Phvul.006G105600 5.0kb downstream 5.0kb downstream 35624 true Chr06: 21475161-21510784 Phaseolus vulgaris
Phvul.006G105600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21475161-21480160 Phaseolus vulgaris
Phvul.006G105600 10.0kb upstream 10.0kb upstream 40624 true Chr06: 21480161-21520784 Phaseolus vulgaris
Phvul.006G105600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21510785-21520784 Phaseolus vulgaris
Phvul.006G105600 10.0kb downstream 10.0kb downstream 40624 true Chr06: 21470161-21510784 Phaseolus vulgaris
Phvul.006G105600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21470161-21480160 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041048 5273 Angiosperm View MSA
122304922 5265 Fabidae View MSA
124065601 5270 Rosid View MSA
123736517 5271 Pentapetalae View MSA
122790322 5272 Eudicot View MSA
121344332 5274 Embryophyte View MSA
123425347 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.1969 0.0 6.27059   Low
cufflinks 5.10538 0.0 13.5644    
cufflinks 5.79196 0.0 15.2346    
cufflinks 3.45856 0.0 9.53265   Low
cufflinks 6.12053 0.0 16.1233    
cufflinks 6.16687 0.0 16.1904    
cufflinks 5.89902 0.0 15.5503    
cufflinks 6.96274 0.0 18.1522    
cufflinks 5.78216 0.0 15.2881    
cufflinks 10.3892 0.0 26.8583   High
cufflinks 4.49275 0.0 12.1015    

0 Strain