Gene : Phvul.006G107600 P. vulgaris v2.1
Defline:  (1 of 1) K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Genomic Order:  1068
Name:  ? Phvul.006G107600 Secondary Identifier:  ? PAC:37172976
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G107600 0.5kb upstream 0.5kb upstream 31836 true Chr06: 21720270-21752105 Phaseolus vulgaris
Phvul.006G107600 0.5kb upstream 0.5kb upstream 500 false Chr06: 21720270-21720769 Phaseolus vulgaris
Phvul.006G107600 0.5kb downstream 0.5kb downstream 31836 true Chr06: 21720770-21752605 Phaseolus vulgaris
Phvul.006G107600 0.5kb downstream 0.5kb downstream 500 false Chr06: 21752106-21752605 Phaseolus vulgaris
Phvul.006G107600 1.0kb upstream 1.0kb upstream 32336 true Chr06: 21719770-21752105 Phaseolus vulgaris
Phvul.006G107600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21719770-21720769 Phaseolus vulgaris
Phvul.006G107600 1.0kb downstream 1.0kb downstream 32336 true Chr06: 21720770-21753105 Phaseolus vulgaris
Phvul.006G107600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21752106-21753105 Phaseolus vulgaris
Phvul.006G107600 2.0kb upstream 2.0kb upstream 33336 true Chr06: 21718770-21752105 Phaseolus vulgaris
Phvul.006G107600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21718770-21720769 Phaseolus vulgaris
Phvul.006G107600 2.0kb downstream 2.0kb downstream 33336 true Chr06: 21720770-21754105 Phaseolus vulgaris
Phvul.006G107600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21752106-21754105 Phaseolus vulgaris
Phvul.006G107600 5.0kb upstream 5.0kb upstream 36336 true Chr06: 21715770-21752105 Phaseolus vulgaris
Phvul.006G107600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21715770-21720769 Phaseolus vulgaris
Phvul.006G107600 5.0kb downstream 5.0kb downstream 36336 true Chr06: 21720770-21757105 Phaseolus vulgaris
Phvul.006G107600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21752106-21757105 Phaseolus vulgaris
Phvul.006G107600 10.0kb upstream 10.0kb upstream 41336 true Chr06: 21710770-21752105 Phaseolus vulgaris
Phvul.006G107600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21710770-21720769 Phaseolus vulgaris
Phvul.006G107600 10.0kb downstream 10.0kb downstream 41336 true Chr06: 21720770-21762105 Phaseolus vulgaris
Phvul.006G107600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21752106-21762105 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122300550 5265 Fabidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.6555 0.0 7.47501   Low
cufflinks 8.59982 0.0 22.3168    
cufflinks 10.6248 0.0 27.4657    
cufflinks 6.55802 0.0 17.2823    
cufflinks 9.597 0.0 24.8704    
cufflinks 16.1992 0.0 42.0893   High
cufflinks 8.77609 0.0 22.7784    
cufflinks 9.49241 0.0 24.569    
cufflinks 9.59937 0.0 24.8749    
cufflinks 10.2332 0.0 26.4704    
cufflinks 10.5957 0.0 27.4157    

0 Strain