Gene : Phvul.006G107800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF80 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1069
Name:  ? Phvul.006G107800 Secondary Identifier:  ? PAC:37172110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G107800 0.5kb upstream 0.5kb upstream 2469 true Chr06: 21753563-21756031 Phaseolus vulgaris
Phvul.006G107800 0.5kb upstream 0.5kb upstream 500 false Chr06: 21753563-21754062 Phaseolus vulgaris
Phvul.006G107800 0.5kb downstream 0.5kb downstream 2469 true Chr06: 21754063-21756531 Phaseolus vulgaris
Phvul.006G107800 0.5kb downstream 0.5kb downstream 500 false Chr06: 21756032-21756531 Phaseolus vulgaris
Phvul.006G107800 1.0kb upstream 1.0kb upstream 2969 true Chr06: 21753063-21756031 Phaseolus vulgaris
Phvul.006G107800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21753063-21754062 Phaseolus vulgaris
Phvul.006G107800 1.0kb downstream 1.0kb downstream 2969 true Chr06: 21754063-21757031 Phaseolus vulgaris
Phvul.006G107800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21756032-21757031 Phaseolus vulgaris
Phvul.006G107800 2.0kb upstream 2.0kb upstream 3969 true Chr06: 21752063-21756031 Phaseolus vulgaris
Phvul.006G107800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21752063-21754062 Phaseolus vulgaris
Phvul.006G107800 2.0kb downstream 2.0kb downstream 3969 true Chr06: 21754063-21758031 Phaseolus vulgaris
Phvul.006G107800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21756032-21758031 Phaseolus vulgaris
Phvul.006G107800 5.0kb upstream 5.0kb upstream 6969 true Chr06: 21749063-21756031 Phaseolus vulgaris
Phvul.006G107800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21749063-21754062 Phaseolus vulgaris
Phvul.006G107800 5.0kb downstream 5.0kb downstream 6969 true Chr06: 21754063-21761031 Phaseolus vulgaris
Phvul.006G107800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21756032-21761031 Phaseolus vulgaris
Phvul.006G107800 10.0kb upstream 10.0kb upstream 11969 true Chr06: 21744063-21756031 Phaseolus vulgaris
Phvul.006G107800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21744063-21754062 Phaseolus vulgaris
Phvul.006G107800 10.0kb downstream 10.0kb downstream 11969 true Chr06: 21754063-21766031 Phaseolus vulgaris
Phvul.006G107800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21756032-21766031 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122301536 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4623 0.0 32.6235    
cufflinks 5.40196 0.0 15.0782    
cufflinks 14.9281 0.0 38.7978    
cufflinks 4.48914 0.0 12.8042   Low
cufflinks 4.87693 0.0 13.8007   Low
cufflinks 17.4211 0.0 45.0978   High
cufflinks 16.7296 0.0 43.3148    
cufflinks 8.80368 0.0 23.5125    
cufflinks 4.66054 0.0 13.1528   Low
cufflinks 22.9147 0.0 59.2361   High
cufflinks 8.83359 0.0 23.6854    

0 Strain