Gene : Phvul.006G108400 P. vulgaris v2.1
Defline:  (1 of 5) PTHR27001:SF100 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  1075
Name:  ? Phvul.006G108400 Secondary Identifier:  ? PAC:37172515
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G108400 0.5kb upstream 0.5kb upstream 3549 true Chr06: 21794085-21797633 Phaseolus vulgaris
Phvul.006G108400 0.5kb upstream 0.5kb upstream 500 false Chr06: 21797134-21797633 Phaseolus vulgaris
Phvul.006G108400 0.5kb downstream 0.5kb downstream 3549 true Chr06: 21793585-21797133 Phaseolus vulgaris
Phvul.006G108400 0.5kb downstream 0.5kb downstream 500 false Chr06: 21793585-21794084 Phaseolus vulgaris
Phvul.006G108400 1.0kb upstream 1.0kb upstream 4049 true Chr06: 21794085-21798133 Phaseolus vulgaris
Phvul.006G108400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21797134-21798133 Phaseolus vulgaris
Phvul.006G108400 1.0kb downstream 1.0kb downstream 4049 true Chr06: 21793085-21797133 Phaseolus vulgaris
Phvul.006G108400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21793085-21794084 Phaseolus vulgaris
Phvul.006G108400 2.0kb upstream 2.0kb upstream 5049 true Chr06: 21794085-21799133 Phaseolus vulgaris
Phvul.006G108400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21797134-21799133 Phaseolus vulgaris
Phvul.006G108400 2.0kb downstream 2.0kb downstream 5049 true Chr06: 21792085-21797133 Phaseolus vulgaris
Phvul.006G108400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21792085-21794084 Phaseolus vulgaris
Phvul.006G108400 5.0kb upstream 5.0kb upstream 8049 true Chr06: 21794085-21802133 Phaseolus vulgaris
Phvul.006G108400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21797134-21802133 Phaseolus vulgaris
Phvul.006G108400 5.0kb downstream 5.0kb downstream 8049 true Chr06: 21789085-21797133 Phaseolus vulgaris
Phvul.006G108400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21789085-21794084 Phaseolus vulgaris
Phvul.006G108400 10.0kb upstream 10.0kb upstream 13049 true Chr06: 21794085-21807133 Phaseolus vulgaris
Phvul.006G108400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21797134-21807133 Phaseolus vulgaris
Phvul.006G108400 10.0kb downstream 10.0kb downstream 13049 true Chr06: 21784085-21797133 Phaseolus vulgaris
Phvul.006G108400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21784085-21794084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029673 5273 Angiosperm View MSA
122252077 5265 Fabidae Singleton cluster - no MSA
124072230 5270 Rosid View MSA
123746804 5271 Pentapetalae View MSA
122772037 5272 Eudicot View MSA
121298975 5274 Embryophyte View MSA
123336907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.27184 0.0 12.2065    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.83378 0.0 5.79052    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00821112 0.0 0.0439204 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain