Gene : Phvul.L001759 P. vulgaris v2.1
Defline:  (1 of 14) PF14577 - Sieve element occlusion C-terminus (SEO_C) Genomic Order:  2
Name:  ? Phvul.L001759 Secondary Identifier:  ? PAC:37152171
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001759 0.5kb upstream 0.5kb upstream 4937 true scaffold_28: 68681-73617 Phaseolus vulgaris
Phvul.L001759 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 73118-73617 Phaseolus vulgaris
Phvul.L001759 0.5kb downstream 0.5kb downstream 4937 true scaffold_28: 68181-73117 Phaseolus vulgaris
Phvul.L001759 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 68181-68680 Phaseolus vulgaris
Phvul.L001759 1.0kb upstream 1.0kb upstream 5437 true scaffold_28: 68681-74117 Phaseolus vulgaris
Phvul.L001759 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 73118-74117 Phaseolus vulgaris
Phvul.L001759 1.0kb downstream 1.0kb downstream 5437 true scaffold_28: 67681-73117 Phaseolus vulgaris
Phvul.L001759 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 67681-68680 Phaseolus vulgaris
Phvul.L001759 2.0kb upstream 2.0kb upstream 6437 true scaffold_28: 68681-75117 Phaseolus vulgaris
Phvul.L001759 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 73118-75117 Phaseolus vulgaris
Phvul.L001759 2.0kb downstream 2.0kb downstream 6437 true scaffold_28: 66681-73117 Phaseolus vulgaris
Phvul.L001759 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 66681-68680 Phaseolus vulgaris
Phvul.L001759 5.0kb upstream 5.0kb upstream 9437 true scaffold_28: 68681-78117 Phaseolus vulgaris
Phvul.L001759 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 73118-78117 Phaseolus vulgaris
Phvul.L001759 5.0kb downstream 5.0kb downstream 9437 true scaffold_28: 63681-73117 Phaseolus vulgaris
Phvul.L001759 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 63681-68680 Phaseolus vulgaris
Phvul.L001759 10.0kb upstream 10.0kb upstream 14437 true scaffold_28: 68681-83117 Phaseolus vulgaris
Phvul.L001759 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 73118-83117 Phaseolus vulgaris
Phvul.L001759 10.0kb downstream 10.0kb downstream 14437 true scaffold_28: 58681-73117 Phaseolus vulgaris
Phvul.L001759 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 58681-68680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656546 5273 Angiosperm View MSA
122305566 5265 Fabidae View MSA
124036663 5270 Rosid View MSA
123609942 5271 Pentapetalae View MSA
122644580 5272 Eudicot View MSA
120928619 5274 Embryophyte View MSA
122969214 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.578255 0.0 2.03514    
cufflinks 12.1178 0.0 31.5724   High
cufflinks 0.293193 0.0 1.09451 Low  
cufflinks 0.589959 0.0 2.08092    
cufflinks 2.65581 0.0 7.91172    
cufflinks 0.645946 0.0 2.24298    
cufflinks 0.0146498 0.0 0.0717476 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0471175 0.0 0.204628 Low Low
cufflinks 3.98128 0.0 11.3086    
cufflinks 2.76941 0.0 8.2004    

0 Strain