Gene : Phvul.L001670 P. vulgaris v2.1
Defline:  (1 of 2) K03264 - translation initiation factor 6 (EIF6) Genomic Order:  1
Name:  ? Phvul.L001670 Secondary Identifier:  ? PAC:37152186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001670 0.5kb upstream 0.5kb upstream 4631 true scaffold_43: 123735-128365 Phaseolus vulgaris
Phvul.L001670 0.5kb upstream 0.5kb upstream 500 false scaffold_43: 123735-124234 Phaseolus vulgaris
Phvul.L001670 0.5kb downstream 0.5kb downstream 4631 true scaffold_43: 124235-128865 Phaseolus vulgaris
Phvul.L001670 0.5kb downstream 0.5kb downstream 500 false scaffold_43: 128366-128865 Phaseolus vulgaris
Phvul.L001670 1.0kb upstream 1.0kb upstream 5131 true scaffold_43: 123235-128365 Phaseolus vulgaris
Phvul.L001670 1.0kb upstream 1.0kb upstream 1000 false scaffold_43: 123235-124234 Phaseolus vulgaris
Phvul.L001670 1.0kb downstream 1.0kb downstream 5131 true scaffold_43: 124235-129365 Phaseolus vulgaris
Phvul.L001670 1.0kb downstream 1.0kb downstream 1000 false scaffold_43: 128366-129365 Phaseolus vulgaris
Phvul.L001670 2.0kb upstream 2.0kb upstream 6131 true scaffold_43: 122235-128365 Phaseolus vulgaris
Phvul.L001670 2.0kb upstream 2.0kb upstream 2000 false scaffold_43: 122235-124234 Phaseolus vulgaris
Phvul.L001670 2.0kb downstream 2.0kb downstream 6131 true scaffold_43: 124235-130365 Phaseolus vulgaris
Phvul.L001670 2.0kb downstream 2.0kb downstream 2000 false scaffold_43: 128366-130365 Phaseolus vulgaris
Phvul.L001670 5.0kb upstream 5.0kb upstream 9131 true scaffold_43: 119235-128365 Phaseolus vulgaris
Phvul.L001670 5.0kb upstream 5.0kb upstream 5000 false scaffold_43: 119235-124234 Phaseolus vulgaris
Phvul.L001670 5.0kb downstream 5.0kb downstream 9131 true scaffold_43: 124235-133365 Phaseolus vulgaris
Phvul.L001670 5.0kb downstream 5.0kb downstream 5000 false scaffold_43: 128366-133365 Phaseolus vulgaris
Phvul.L001670 10.0kb upstream 10.0kb upstream 14131 true scaffold_43: 114235-128365 Phaseolus vulgaris
Phvul.L001670 10.0kb upstream 10.0kb upstream 10000 false scaffold_43: 114235-124234 Phaseolus vulgaris
Phvul.L001670 10.0kb downstream 10.0kb downstream 14131 true scaffold_43: 124235-138365 Phaseolus vulgaris
Phvul.L001670 10.0kb downstream 10.0kb downstream 10000 false scaffold_43: 128366-138365 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254902 5265 Fabidae View MSA
124066195 5270 Rosid View MSA
123751817 5271 Pentapetalae View MSA
122790652 5272 Eudicot View MSA
122042678 5273 Angiosperm View MSA
121344739 5274 Embryophyte View MSA
123424847 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1933 0.0 28.943    
cufflinks 10.832 0.0 30.6017    
cufflinks 6.62109 0.0 19.6094   Low
cufflinks 21.9472 0.0 58.5041   High
cufflinks 12.0239 0.0 33.7475    
cufflinks 5.5383 0.0 16.8347   Low
cufflinks 6.69632 0.0 19.9743   Low
cufflinks 10.3657 0.0 29.387    
cufflinks 12.3797 0.0 34.7129    
cufflinks 18.0125 0.0 48.68   High
cufflinks 8.34962 0.0 24.3269    

0 Strain