Gene : Phvul.009G000900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR34574:SF2 - EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  9
Name:  ? Phvul.009G000900 Secondary Identifier:  ? PAC:37148783
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G000900 0.5kb upstream 0.5kb upstream 4423 true Chr09: 299270-303692 Phaseolus vulgaris
Phvul.009G000900 0.5kb upstream 0.5kb upstream 500 false Chr09: 303193-303692 Phaseolus vulgaris
Phvul.009G000900 0.5kb downstream 0.5kb downstream 4423 true Chr09: 298770-303192 Phaseolus vulgaris
Phvul.009G000900 0.5kb downstream 0.5kb downstream 500 false Chr09: 298770-299269 Phaseolus vulgaris
Phvul.009G000900 1.0kb upstream 1.0kb upstream 4923 true Chr09: 299270-304192 Phaseolus vulgaris
Phvul.009G000900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 303193-304192 Phaseolus vulgaris
Phvul.009G000900 1.0kb downstream 1.0kb downstream 4923 true Chr09: 298270-303192 Phaseolus vulgaris
Phvul.009G000900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 298270-299269 Phaseolus vulgaris
Phvul.009G000900 2.0kb upstream 2.0kb upstream 5923 true Chr09: 299270-305192 Phaseolus vulgaris
Phvul.009G000900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 303193-305192 Phaseolus vulgaris
Phvul.009G000900 2.0kb downstream 2.0kb downstream 5923 true Chr09: 297270-303192 Phaseolus vulgaris
Phvul.009G000900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 297270-299269 Phaseolus vulgaris
Phvul.009G000900 5.0kb upstream 5.0kb upstream 8923 true Chr09: 299270-308192 Phaseolus vulgaris
Phvul.009G000900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 303193-308192 Phaseolus vulgaris
Phvul.009G000900 5.0kb downstream 5.0kb downstream 8923 true Chr09: 294270-303192 Phaseolus vulgaris
Phvul.009G000900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 294270-299269 Phaseolus vulgaris
Phvul.009G000900 10.0kb upstream 10.0kb upstream 13923 true Chr09: 299270-313192 Phaseolus vulgaris
Phvul.009G000900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 303193-313192 Phaseolus vulgaris
Phvul.009G000900 10.0kb downstream 10.0kb downstream 13923 true Chr09: 289270-303192 Phaseolus vulgaris
Phvul.009G000900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 289270-299269 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314356 5265 Fabidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3561 0.0 37.7585    
cufflinks 18.9293 0.0 49.1834    
cufflinks 11.561 0.0 30.8058    
cufflinks 17.5186 0.0 45.7926    
cufflinks 14.8723 0.0 39.1726    
cufflinks 14.7928 0.0 38.8549    
cufflinks 3.08888 0.0 9.37398   Low
cufflinks 1.53086 0.0 5.00878   Low
cufflinks 4.00286 0.0 11.8206    
cufflinks 12.4677 0.0 33.1321    
cufflinks 14.8469 0.0 39.0702    

0 Strain