Gene : Phvul.009G002100 P. vulgaris v2.1
Defline:  (1 of 1) K02834 - ribosome-binding factor A (rbfA) Genomic Order:  21
Name:  ? Phvul.009G002100 Secondary Identifier:  ? PAC:37151524
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G002100 0.5kb upstream 0.5kb upstream 2538 true Chr09: 410932-413469 Phaseolus vulgaris
Phvul.009G002100 0.5kb upstream 0.5kb upstream 500 false Chr09: 410932-411431 Phaseolus vulgaris
Phvul.009G002100 0.5kb downstream 0.5kb downstream 2538 true Chr09: 411432-413969 Phaseolus vulgaris
Phvul.009G002100 0.5kb downstream 0.5kb downstream 500 false Chr09: 413470-413969 Phaseolus vulgaris
Phvul.009G002100 1.0kb upstream 1.0kb upstream 3038 true Chr09: 410432-413469 Phaseolus vulgaris
Phvul.009G002100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 410432-411431 Phaseolus vulgaris
Phvul.009G002100 1.0kb downstream 1.0kb downstream 3038 true Chr09: 411432-414469 Phaseolus vulgaris
Phvul.009G002100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 413470-414469 Phaseolus vulgaris
Phvul.009G002100 2.0kb upstream 2.0kb upstream 4038 true Chr09: 409432-413469 Phaseolus vulgaris
Phvul.009G002100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 409432-411431 Phaseolus vulgaris
Phvul.009G002100 2.0kb downstream 2.0kb downstream 4038 true Chr09: 411432-415469 Phaseolus vulgaris
Phvul.009G002100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 413470-415469 Phaseolus vulgaris
Phvul.009G002100 5.0kb upstream 5.0kb upstream 7038 true Chr09: 406432-413469 Phaseolus vulgaris
Phvul.009G002100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 406432-411431 Phaseolus vulgaris
Phvul.009G002100 5.0kb downstream 5.0kb downstream 7038 true Chr09: 411432-418469 Phaseolus vulgaris
Phvul.009G002100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 413470-418469 Phaseolus vulgaris
Phvul.009G002100 10.0kb upstream 10.0kb upstream 12038 true Chr09: 401432-413469 Phaseolus vulgaris
Phvul.009G002100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 401432-411431 Phaseolus vulgaris
Phvul.009G002100 10.0kb downstream 10.0kb downstream 12038 true Chr09: 411432-423469 Phaseolus vulgaris
Phvul.009G002100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 413470-423469 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026544 5273 Angiosperm View MSA
122307425 5265 Fabidae View MSA
124067747 5270 Rosid View MSA
123736388 5271 Pentapetalae View MSA
122793654 5272 Eudicot View MSA
121344298 5274 Embryophyte View MSA
123423788 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.80688 0.0 22.1305    
cufflinks 12.1396 0.0 33.1218    
cufflinks 43.2188 0.0 111.887 High High
cufflinks 6.64597 0.0 19.3313    
cufflinks 6.86047 0.0 19.7653    
cufflinks 25.3018 0.0 65.7898   High
cufflinks 2.31052 0.0 7.48533   Low
cufflinks 1.88478 0.0 6.24176   Low
cufflinks 2.82179 0.0 8.98023    
cufflinks 8.96465 0.0 25.1274    
cufflinks 6.21043 0.0 18.0772    

0 Strain