Gene : Phvul.006G110500 P. vulgaris v2.1
Defline:  (1 of 1) K10389 - tubulin gamma (TUBG) Genomic Order:  1095
Name:  ? Phvul.006G110500 Secondary Identifier:  ? PAC:37173820
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6608 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6609 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7179 Phaseolus vulgaris pathologic  
Pvulgaris SALVADEHYPOX-PWY Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G110500 0.5kb upstream 0.5kb upstream 6459 true Chr06: 21936983-21943441 Phaseolus vulgaris
Phvul.006G110500 0.5kb upstream 0.5kb upstream 500 false Chr06: 21942942-21943441 Phaseolus vulgaris
Phvul.006G110500 0.5kb downstream 0.5kb downstream 6459 true Chr06: 21936483-21942941 Phaseolus vulgaris
Phvul.006G110500 0.5kb downstream 0.5kb downstream 500 false Chr06: 21936483-21936982 Phaseolus vulgaris
Phvul.006G110500 1.0kb upstream 1.0kb upstream 6959 true Chr06: 21936983-21943941 Phaseolus vulgaris
Phvul.006G110500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21942942-21943941 Phaseolus vulgaris
Phvul.006G110500 1.0kb downstream 1.0kb downstream 6959 true Chr06: 21935983-21942941 Phaseolus vulgaris
Phvul.006G110500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21935983-21936982 Phaseolus vulgaris
Phvul.006G110500 2.0kb upstream 2.0kb upstream 7959 true Chr06: 21936983-21944941 Phaseolus vulgaris
Phvul.006G110500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21942942-21944941 Phaseolus vulgaris
Phvul.006G110500 2.0kb downstream 2.0kb downstream 7959 true Chr06: 21934983-21942941 Phaseolus vulgaris
Phvul.006G110500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21934983-21936982 Phaseolus vulgaris
Phvul.006G110500 5.0kb upstream 5.0kb upstream 10959 true Chr06: 21936983-21947941 Phaseolus vulgaris
Phvul.006G110500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21942942-21947941 Phaseolus vulgaris
Phvul.006G110500 5.0kb downstream 5.0kb downstream 10959 true Chr06: 21931983-21942941 Phaseolus vulgaris
Phvul.006G110500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21931983-21936982 Phaseolus vulgaris
Phvul.006G110500 10.0kb upstream 10.0kb upstream 15959 true Chr06: 21936983-21952941 Phaseolus vulgaris
Phvul.006G110500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21942942-21952941 Phaseolus vulgaris
Phvul.006G110500 10.0kb downstream 10.0kb downstream 15959 true Chr06: 21926983-21942941 Phaseolus vulgaris
Phvul.006G110500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21926983-21936982 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299558 5265 Fabidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.72673 0.0 21.9172   Low
cufflinks 15.7452 0.0 50.4875   High
cufflinks 11.7921 0.0 39.6492    
cufflinks 7.81371 0.0 24.4158    
cufflinks 9.40419 0.0 29.0044    
cufflinks 12.7278 0.0 42.6288    
cufflinks 10.8994 0.0 36.974    
cufflinks 10.5226 0.0 36.6921    
cufflinks 12.6874 0.0 41.6718    
cufflinks 3.73668 0.0 15.8785   Low
cufflinks 12.0766 0.0 40.4868    

0 Strain