Gene : Phvul.009G068800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22846:SF2 - F-BOX-LIKE/WD REPEAT-CONTAINING PROTEIN EBI Genomic Order:  707
Name:  ? Phvul.009G068800 Secondary Identifier:  ? PAC:37150288
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G068800 0.5kb upstream 0.5kb upstream 9490 true Chr09: 12073965-12083454 Phaseolus vulgaris
Phvul.009G068800 0.5kb upstream 0.5kb upstream 500 false Chr09: 12073965-12074464 Phaseolus vulgaris
Phvul.009G068800 0.5kb downstream 0.5kb downstream 9490 true Chr09: 12074465-12083954 Phaseolus vulgaris
Phvul.009G068800 0.5kb downstream 0.5kb downstream 500 false Chr09: 12083455-12083954 Phaseolus vulgaris
Phvul.009G068800 1.0kb upstream 1.0kb upstream 9990 true Chr09: 12073465-12083454 Phaseolus vulgaris
Phvul.009G068800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12073465-12074464 Phaseolus vulgaris
Phvul.009G068800 1.0kb downstream 1.0kb downstream 9990 true Chr09: 12074465-12084454 Phaseolus vulgaris
Phvul.009G068800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12083455-12084454 Phaseolus vulgaris
Phvul.009G068800 2.0kb upstream 2.0kb upstream 10990 true Chr09: 12072465-12083454 Phaseolus vulgaris
Phvul.009G068800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12072465-12074464 Phaseolus vulgaris
Phvul.009G068800 2.0kb downstream 2.0kb downstream 10990 true Chr09: 12074465-12085454 Phaseolus vulgaris
Phvul.009G068800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12083455-12085454 Phaseolus vulgaris
Phvul.009G068800 5.0kb upstream 5.0kb upstream 13990 true Chr09: 12069465-12083454 Phaseolus vulgaris
Phvul.009G068800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12069465-12074464 Phaseolus vulgaris
Phvul.009G068800 5.0kb downstream 5.0kb downstream 13990 true Chr09: 12074465-12088454 Phaseolus vulgaris
Phvul.009G068800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12083455-12088454 Phaseolus vulgaris
Phvul.009G068800 10.0kb upstream 10.0kb upstream 18990 true Chr09: 12064465-12083454 Phaseolus vulgaris
Phvul.009G068800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12064465-12074464 Phaseolus vulgaris
Phvul.009G068800 10.0kb downstream 10.0kb downstream 18990 true Chr09: 12074465-12093454 Phaseolus vulgaris
Phvul.009G068800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12083455-12093454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300683 5265 Fabidae View MSA
124036659 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.1759 0.0 6.67582   Low
cufflinks 4.05904 0.0 11.626    
cufflinks 4.97202 0.0 13.9293    
cufflinks 1.6442 0.0 5.27195   Low
cufflinks 3.46222 0.0 10.2059    
cufflinks 4.68561 0.0 13.2129    
cufflinks 4.40634 0.0 12.4759    
cufflinks 5.06706 0.0 14.1183    
cufflinks 3.3145 0.0 9.68305    
cufflinks 6.81297 0.0 18.6517   High
cufflinks 3.91759 0.0 11.3363    

0 Strain