Gene : Phvul.009G004700 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.5.3 - Phosphoribosylformylglycinamidine synthase / Phosphoribosylformylglycinamidine synthetase Genomic Order:  46
Name:  ? Phvul.009G004700 Secondary Identifier:  ? PAC:37148693
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6121 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G004700 0.5kb upstream 0.5kb upstream 5209 true Chr09: 855090-860298 Phaseolus vulgaris
Phvul.009G004700 0.5kb upstream 0.5kb upstream 500 false Chr09: 855090-855589 Phaseolus vulgaris
Phvul.009G004700 0.5kb downstream 0.5kb downstream 5209 true Chr09: 855590-860798 Phaseolus vulgaris
Phvul.009G004700 0.5kb downstream 0.5kb downstream 500 false Chr09: 860299-860798 Phaseolus vulgaris
Phvul.009G004700 1.0kb upstream 1.0kb upstream 5709 true Chr09: 854590-860298 Phaseolus vulgaris
Phvul.009G004700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 854590-855589 Phaseolus vulgaris
Phvul.009G004700 1.0kb downstream 1.0kb downstream 5709 true Chr09: 855590-861298 Phaseolus vulgaris
Phvul.009G004700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 860299-861298 Phaseolus vulgaris
Phvul.009G004700 2.0kb upstream 2.0kb upstream 6709 true Chr09: 853590-860298 Phaseolus vulgaris
Phvul.009G004700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 853590-855589 Phaseolus vulgaris
Phvul.009G004700 2.0kb downstream 2.0kb downstream 6709 true Chr09: 855590-862298 Phaseolus vulgaris
Phvul.009G004700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 860299-862298 Phaseolus vulgaris
Phvul.009G004700 5.0kb upstream 5.0kb upstream 9709 true Chr09: 850590-860298 Phaseolus vulgaris
Phvul.009G004700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 850590-855589 Phaseolus vulgaris
Phvul.009G004700 5.0kb downstream 5.0kb downstream 9709 true Chr09: 855590-865298 Phaseolus vulgaris
Phvul.009G004700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 860299-865298 Phaseolus vulgaris
Phvul.009G004700 10.0kb upstream 10.0kb upstream 14709 true Chr09: 845590-860298 Phaseolus vulgaris
Phvul.009G004700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 845590-855589 Phaseolus vulgaris
Phvul.009G004700 10.0kb downstream 10.0kb downstream 14709 true Chr09: 855590-870298 Phaseolus vulgaris
Phvul.009G004700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 860299-870298 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301491 5265 Fabidae View MSA
124062786 5270 Rosid View MSA
123736916 5271 Pentapetalae View MSA
122788204 5272 Eudicot View MSA
122046400 5273 Angiosperm View MSA
121347148 5274 Embryophyte View MSA
123424914 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.09824 0.0 18.4059   Low
cufflinks 11.6831 0.0 30.271    
cufflinks 12.8287 0.0 33.3395    
cufflinks 9.97 0.0 25.7719    
cufflinks 21.5537 0.0 57.3667    
cufflinks 7.24415 0.0 18.773   Low
cufflinks 26.7145 0.0 72.7516    
cufflinks 102.251 0.0 338.457 High High
cufflinks 38.9877 0.0 110.048 High High
cufflinks 23.9836 0.0 64.6247    
cufflinks 7.4478 0.0 19.3092    

0 Strain