Gene : Phvul.010G157600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  1587
Name:  ? Phvul.010G157600 Secondary Identifier:  ? PAC:37144301
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G157600 0.5kb upstream 0.5kb upstream 12343 true Chr10: 43625341-43637683 Phaseolus vulgaris
Phvul.010G157600 0.5kb upstream 0.5kb upstream 500 false Chr10: 43625341-43625840 Phaseolus vulgaris
Phvul.010G157600 0.5kb downstream 0.5kb downstream 12343 true Chr10: 43625841-43638183 Phaseolus vulgaris
Phvul.010G157600 0.5kb downstream 0.5kb downstream 500 false Chr10: 43637684-43638183 Phaseolus vulgaris
Phvul.010G157600 1.0kb upstream 1.0kb upstream 12843 true Chr10: 43624841-43637683 Phaseolus vulgaris
Phvul.010G157600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43624841-43625840 Phaseolus vulgaris
Phvul.010G157600 1.0kb downstream 1.0kb downstream 12843 true Chr10: 43625841-43638683 Phaseolus vulgaris
Phvul.010G157600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43637684-43638683 Phaseolus vulgaris
Phvul.010G157600 2.0kb upstream 2.0kb upstream 13843 true Chr10: 43623841-43637683 Phaseolus vulgaris
Phvul.010G157600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43623841-43625840 Phaseolus vulgaris
Phvul.010G157600 2.0kb downstream 2.0kb downstream 13843 true Chr10: 43625841-43639683 Phaseolus vulgaris
Phvul.010G157600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43637684-43639683 Phaseolus vulgaris
Phvul.010G157600 5.0kb upstream 5.0kb upstream 16843 true Chr10: 43620841-43637683 Phaseolus vulgaris
Phvul.010G157600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43620841-43625840 Phaseolus vulgaris
Phvul.010G157600 5.0kb downstream 5.0kb downstream 16843 true Chr10: 43625841-43642683 Phaseolus vulgaris
Phvul.010G157600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43637684-43642683 Phaseolus vulgaris
Phvul.010G157600 10.0kb upstream 10.0kb upstream 21843 true Chr10: 43615841-43637683 Phaseolus vulgaris
Phvul.010G157600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43615841-43625840 Phaseolus vulgaris
Phvul.010G157600 10.0kb downstream 10.0kb downstream 21843 true Chr10: 43625841-43647683 Phaseolus vulgaris
Phvul.010G157600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43637684-43647683 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306854 5265 Fabidae View MSA
124070907 5270 Rosid View MSA
123740831 5271 Pentapetalae View MSA
122787198 5272 Eudicot View MSA
122042006 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121344992 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.6027 0.0 217.235 High High
cufflinks 18.8613 0.0 60.1579    
cufflinks 24.9196 0.0 72.9138    
cufflinks 7.95441 0.0 26.3205   Low
cufflinks 29.1327 0.0 85.5941    
cufflinks 14.7336 0.0 50.2972    
cufflinks 14.7953 0.0 44.446    
cufflinks 11.4203 0.0 37.7875    
cufflinks 21.5109 0.0 63.8551    
cufflinks 61.915 0.0 191.983 High High
cufflinks 12.3552 0.0 41.0012    

0 Strain