Gene : Phvul.010G158200 P. vulgaris v2.1
Defline:  (1 of 13) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED Genomic Order:  1593
Name:  ? Phvul.010G158200 Secondary Identifier:  ? PAC:37142576
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G158200 0.5kb upstream 0.5kb upstream 5769 true Chr10: 43728807-43734575 Phaseolus vulgaris
Phvul.010G158200 0.5kb upstream 0.5kb upstream 500 false Chr10: 43728807-43729306 Phaseolus vulgaris
Phvul.010G158200 0.5kb downstream 0.5kb downstream 5769 true Chr10: 43729307-43735075 Phaseolus vulgaris
Phvul.010G158200 0.5kb downstream 0.5kb downstream 500 false Chr10: 43734576-43735075 Phaseolus vulgaris
Phvul.010G158200 1.0kb upstream 1.0kb upstream 6269 true Chr10: 43728307-43734575 Phaseolus vulgaris
Phvul.010G158200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43728307-43729306 Phaseolus vulgaris
Phvul.010G158200 1.0kb downstream 1.0kb downstream 6269 true Chr10: 43729307-43735575 Phaseolus vulgaris
Phvul.010G158200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43734576-43735575 Phaseolus vulgaris
Phvul.010G158200 2.0kb upstream 2.0kb upstream 7269 true Chr10: 43727307-43734575 Phaseolus vulgaris
Phvul.010G158200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43727307-43729306 Phaseolus vulgaris
Phvul.010G158200 2.0kb downstream 2.0kb downstream 7269 true Chr10: 43729307-43736575 Phaseolus vulgaris
Phvul.010G158200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43734576-43736575 Phaseolus vulgaris
Phvul.010G158200 5.0kb upstream 5.0kb upstream 10269 true Chr10: 43724307-43734575 Phaseolus vulgaris
Phvul.010G158200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43724307-43729306 Phaseolus vulgaris
Phvul.010G158200 5.0kb downstream 5.0kb downstream 10269 true Chr10: 43729307-43739575 Phaseolus vulgaris
Phvul.010G158200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43734576-43739575 Phaseolus vulgaris
Phvul.010G158200 10.0kb upstream 10.0kb upstream 15269 true Chr10: 43719307-43734575 Phaseolus vulgaris
Phvul.010G158200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43719307-43729306 Phaseolus vulgaris
Phvul.010G158200 10.0kb downstream 10.0kb downstream 15269 true Chr10: 43729307-43744575 Phaseolus vulgaris
Phvul.010G158200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43734576-43744575 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296367 5265 Fabidae View MSA
124051641 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.3923 0.0 10.965    
cufflinks 13.7155 0.0 38.0816   High
cufflinks 0.382941 0.0 1.51986 Low Low
cufflinks 11.6344 0.0 32.92   High
cufflinks 5.05236 0.0 15.7761    
cufflinks 2.89503 0.0 9.53013    
cufflinks 6.29592 0.0 18.9009    
cufflinks 4.05007 0.0 12.8116    
cufflinks 5.38798 0.0 16.4468    
cufflinks 2.91253 0.0 9.61149    
cufflinks 5.01329 0.0 15.5646    

0 Strain