Gene : Phvul.006G099300 P. vulgaris v2.1
Defline:  (1 of 2) PF00301 - Rubredoxin (Rubredoxin) Genomic Order:  988
Name:  ? Phvul.006G099300 Secondary Identifier:  ? PAC:37172368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G099300 0.5kb upstream 0.5kb upstream 2124 true Chr06: 21005035-21007158 Phaseolus vulgaris
Phvul.006G099300 0.5kb upstream 0.5kb upstream 500 false Chr06: 21006659-21007158 Phaseolus vulgaris
Phvul.006G099300 0.5kb downstream 0.5kb downstream 2124 true Chr06: 21004535-21006658 Phaseolus vulgaris
Phvul.006G099300 0.5kb downstream 0.5kb downstream 500 false Chr06: 21004535-21005034 Phaseolus vulgaris
Phvul.006G099300 1.0kb upstream 1.0kb upstream 2624 true Chr06: 21005035-21007658 Phaseolus vulgaris
Phvul.006G099300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21006659-21007658 Phaseolus vulgaris
Phvul.006G099300 1.0kb downstream 1.0kb downstream 2624 true Chr06: 21004035-21006658 Phaseolus vulgaris
Phvul.006G099300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21004035-21005034 Phaseolus vulgaris
Phvul.006G099300 2.0kb upstream 2.0kb upstream 3624 true Chr06: 21005035-21008658 Phaseolus vulgaris
Phvul.006G099300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21006659-21008658 Phaseolus vulgaris
Phvul.006G099300 2.0kb downstream 2.0kb downstream 3624 true Chr06: 21003035-21006658 Phaseolus vulgaris
Phvul.006G099300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21003035-21005034 Phaseolus vulgaris
Phvul.006G099300 5.0kb upstream 5.0kb upstream 6624 true Chr06: 21005035-21011658 Phaseolus vulgaris
Phvul.006G099300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21006659-21011658 Phaseolus vulgaris
Phvul.006G099300 5.0kb downstream 5.0kb downstream 6624 true Chr06: 21000035-21006658 Phaseolus vulgaris
Phvul.006G099300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21000035-21005034 Phaseolus vulgaris
Phvul.006G099300 10.0kb upstream 10.0kb upstream 11624 true Chr06: 21005035-21016658 Phaseolus vulgaris
Phvul.006G099300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21006659-21016658 Phaseolus vulgaris
Phvul.006G099300 10.0kb downstream 10.0kb downstream 11624 true Chr06: 20995035-21006658 Phaseolus vulgaris
Phvul.006G099300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20995035-21005034 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305819 5265 Fabidae View MSA
124060784 5270 Rosid View MSA
123739344 5271 Pentapetalae View MSA
122794203 5272 Eudicot View MSA
122043182 5273 Angiosperm View MSA
121348093 5274 Embryophyte View MSA
123428721 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.8935 0.0 196.328 High  
cufflinks 47.8964 0.0 126.266 High  
cufflinks 268.724 0.0 725.77 High High
cufflinks 62.1749 0.0 161.126 High  
cufflinks 42.6659 0.0 113.023 High  
cufflinks 115.945 0.0 300.219 High  
cufflinks 5.05542 0.0 16.5998   Low
cufflinks 9.74005 0.0 30.0148   Low
cufflinks 5.60224 0.0 18.1519   Low
cufflinks 46.2973 0.0 122.076 High  
cufflinks 29.4029 0.0 79.9797    

0 Strain