Gene : Phvul.006G099400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31662:SF6 - DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  989
Name:  ? Phvul.006G099400 Secondary Identifier:  ? PAC:37172147
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G099400 0.5kb upstream 0.5kb upstream 2420 true Chr06: 21008388-21010807 Phaseolus vulgaris
Phvul.006G099400 0.5kb upstream 0.5kb upstream 500 false Chr06: 21010308-21010807 Phaseolus vulgaris
Phvul.006G099400 0.5kb downstream 0.5kb downstream 2420 true Chr06: 21007888-21010307 Phaseolus vulgaris
Phvul.006G099400 0.5kb downstream 0.5kb downstream 500 false Chr06: 21007888-21008387 Phaseolus vulgaris
Phvul.006G099400 1.0kb upstream 1.0kb upstream 2920 true Chr06: 21008388-21011307 Phaseolus vulgaris
Phvul.006G099400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21010308-21011307 Phaseolus vulgaris
Phvul.006G099400 1.0kb downstream 1.0kb downstream 2920 true Chr06: 21007388-21010307 Phaseolus vulgaris
Phvul.006G099400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21007388-21008387 Phaseolus vulgaris
Phvul.006G099400 2.0kb upstream 2.0kb upstream 3920 true Chr06: 21008388-21012307 Phaseolus vulgaris
Phvul.006G099400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21010308-21012307 Phaseolus vulgaris
Phvul.006G099400 2.0kb downstream 2.0kb downstream 3920 true Chr06: 21006388-21010307 Phaseolus vulgaris
Phvul.006G099400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21006388-21008387 Phaseolus vulgaris
Phvul.006G099400 5.0kb upstream 5.0kb upstream 6920 true Chr06: 21008388-21015307 Phaseolus vulgaris
Phvul.006G099400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21010308-21015307 Phaseolus vulgaris
Phvul.006G099400 5.0kb downstream 5.0kb downstream 6920 true Chr06: 21003388-21010307 Phaseolus vulgaris
Phvul.006G099400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21003388-21008387 Phaseolus vulgaris
Phvul.006G099400 10.0kb upstream 10.0kb upstream 11920 true Chr06: 21008388-21020307 Phaseolus vulgaris
Phvul.006G099400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21010308-21020307 Phaseolus vulgaris
Phvul.006G099400 10.0kb downstream 10.0kb downstream 11920 true Chr06: 20998388-21010307 Phaseolus vulgaris
Phvul.006G099400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20998388-21008387 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307303 5265 Fabidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.1612 0.0 86.9249 High  
cufflinks 47.0176 0.0 126.25 High  
cufflinks 18.5965 0.0 48.0938   Low
cufflinks 46.592 0.0 125.274 High  
cufflinks 38.7379 0.0 102.451 High  
cufflinks 29.3924 0.0 76.6051    
cufflinks 31.1265 0.0 81.6884 High  
cufflinks 37.5769 0.0 99.2277 High  
cufflinks 38.4705 0.0 102.393 High  
cufflinks 48.6214 0.0 130.695 High High
cufflinks 46.5412 0.0 125.209 High  

0 Strain