Gene : Phvul.006G099900 P. vulgaris v2.1
Defline:  (1 of 16) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  994
Name:  ? Phvul.006G099900 Secondary Identifier:  ? PAC:37172822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G099900 0.5kb upstream 0.5kb upstream 1463 true Chr06: 21038272-21039734 Phaseolus vulgaris
Phvul.006G099900 0.5kb upstream 0.5kb upstream 500 false Chr06: 21039235-21039734 Phaseolus vulgaris
Phvul.006G099900 0.5kb downstream 0.5kb downstream 1463 true Chr06: 21037772-21039234 Phaseolus vulgaris
Phvul.006G099900 0.5kb downstream 0.5kb downstream 500 false Chr06: 21037772-21038271 Phaseolus vulgaris
Phvul.006G099900 1.0kb upstream 1.0kb upstream 1963 true Chr06: 21038272-21040234 Phaseolus vulgaris
Phvul.006G099900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21039235-21040234 Phaseolus vulgaris
Phvul.006G099900 1.0kb downstream 1.0kb downstream 1963 true Chr06: 21037272-21039234 Phaseolus vulgaris
Phvul.006G099900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21037272-21038271 Phaseolus vulgaris
Phvul.006G099900 2.0kb upstream 2.0kb upstream 2963 true Chr06: 21038272-21041234 Phaseolus vulgaris
Phvul.006G099900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21039235-21041234 Phaseolus vulgaris
Phvul.006G099900 2.0kb downstream 2.0kb downstream 2963 true Chr06: 21036272-21039234 Phaseolus vulgaris
Phvul.006G099900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21036272-21038271 Phaseolus vulgaris
Phvul.006G099900 5.0kb upstream 5.0kb upstream 5963 true Chr06: 21038272-21044234 Phaseolus vulgaris
Phvul.006G099900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21039235-21044234 Phaseolus vulgaris
Phvul.006G099900 5.0kb downstream 5.0kb downstream 5963 true Chr06: 21033272-21039234 Phaseolus vulgaris
Phvul.006G099900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21033272-21038271 Phaseolus vulgaris
Phvul.006G099900 10.0kb upstream 10.0kb upstream 10963 true Chr06: 21038272-21049234 Phaseolus vulgaris
Phvul.006G099900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21039235-21049234 Phaseolus vulgaris
Phvul.006G099900 10.0kb downstream 10.0kb downstream 10963 true Chr06: 21028272-21039234 Phaseolus vulgaris
Phvul.006G099900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21028272-21038271 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254609 5265 Fabidae View MSA
124041939 5270 Rosid View MSA
123742913 5271 Pentapetalae View MSA
122794007 5272 Eudicot View MSA
122048864 5273 Angiosperm View MSA
121311144 5274 Embryophyte View MSA
123348481 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49649 0.0 8.22316    
cufflinks 8.51316 0.0 24.4277    
cufflinks 1.42448 0.0 5.05137   Low
cufflinks 5.23444 0.0 15.7554    
cufflinks 17.0227 0.0 45.917   High
cufflinks 2.95935 0.0 9.58975    
cufflinks 12.0695 0.0 33.3226    
cufflinks 7.5135 0.0 21.8718    
cufflinks 6.41171 0.0 18.8353    
cufflinks 1.67803 0.0 5.77645   Low
cufflinks 16.8148 0.0 45.1668   High

0 Strain