Gene : Phvul.006G102100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31734:SF28 - AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  1015
Name:  ? Phvul.006G102100 Secondary Identifier:  ? PAC:37171492
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G102100 0.5kb upstream 0.5kb upstream 3416 true Chr06: 21200572-21203987 Phaseolus vulgaris
Phvul.006G102100 0.5kb upstream 0.5kb upstream 500 false Chr06: 21200572-21201071 Phaseolus vulgaris
Phvul.006G102100 0.5kb downstream 0.5kb downstream 3416 true Chr06: 21201072-21204487 Phaseolus vulgaris
Phvul.006G102100 0.5kb downstream 0.5kb downstream 500 false Chr06: 21203988-21204487 Phaseolus vulgaris
Phvul.006G102100 1.0kb upstream 1.0kb upstream 3916 true Chr06: 21200072-21203987 Phaseolus vulgaris
Phvul.006G102100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21200072-21201071 Phaseolus vulgaris
Phvul.006G102100 1.0kb downstream 1.0kb downstream 3916 true Chr06: 21201072-21204987 Phaseolus vulgaris
Phvul.006G102100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21203988-21204987 Phaseolus vulgaris
Phvul.006G102100 2.0kb upstream 2.0kb upstream 4916 true Chr06: 21199072-21203987 Phaseolus vulgaris
Phvul.006G102100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21199072-21201071 Phaseolus vulgaris
Phvul.006G102100 2.0kb downstream 2.0kb downstream 4916 true Chr06: 21201072-21205987 Phaseolus vulgaris
Phvul.006G102100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21203988-21205987 Phaseolus vulgaris
Phvul.006G102100 5.0kb upstream 5.0kb upstream 7916 true Chr06: 21196072-21203987 Phaseolus vulgaris
Phvul.006G102100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21196072-21201071 Phaseolus vulgaris
Phvul.006G102100 5.0kb downstream 5.0kb downstream 7916 true Chr06: 21201072-21208987 Phaseolus vulgaris
Phvul.006G102100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21203988-21208987 Phaseolus vulgaris
Phvul.006G102100 10.0kb upstream 10.0kb upstream 12916 true Chr06: 21191072-21203987 Phaseolus vulgaris
Phvul.006G102100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21191072-21201071 Phaseolus vulgaris
Phvul.006G102100 10.0kb downstream 10.0kb downstream 12916 true Chr06: 21201072-21213987 Phaseolus vulgaris
Phvul.006G102100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21203988-21213987 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308156 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.066 0.0 313.928 High  
cufflinks 81.791 0.0 221.66 High  
cufflinks 70.3093 0.0 188.397 High  
cufflinks 86.1335 0.0 234.406 High  
cufflinks 110.254 0.0 306.052 High  
cufflinks 107.868 0.0 300.972 High  
cufflinks 83.0594 0.0 226.09 High  
cufflinks 37.4812 0.0 97.1536 High Low
cufflinks 110.338 0.0 309.313 High  
cufflinks 91.6747 0.0 250.537 High  
cufflinks 153.096 0.0 442.588 High High

0 Strain