Gene : Phvul.010G161900 P. vulgaris v2.1
Defline:  (1 of 6) 2.4.1.69 - Galactoside 2-alpha-L-fucosyltransferase / Secretor-type beta-galactoside alpha-1->2 fucosyltransferase Genomic Order:  1630
Name:  ? Phvul.010G161900 Secondary Identifier:  ? PAC:37143364
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G161900 0.5kb upstream 0.5kb upstream 3796 true Chr10: 43998634-44002429 Phaseolus vulgaris
Phvul.010G161900 0.5kb upstream 0.5kb upstream 500 false Chr10: 44001930-44002429 Phaseolus vulgaris
Phvul.010G161900 0.5kb downstream 0.5kb downstream 3796 true Chr10: 43998134-44001929 Phaseolus vulgaris
Phvul.010G161900 0.5kb downstream 0.5kb downstream 500 false Chr10: 43998134-43998633 Phaseolus vulgaris
Phvul.010G161900 1.0kb upstream 1.0kb upstream 4296 true Chr10: 43998634-44002929 Phaseolus vulgaris
Phvul.010G161900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44001930-44002929 Phaseolus vulgaris
Phvul.010G161900 1.0kb downstream 1.0kb downstream 4296 true Chr10: 43997634-44001929 Phaseolus vulgaris
Phvul.010G161900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43997634-43998633 Phaseolus vulgaris
Phvul.010G161900 2.0kb upstream 2.0kb upstream 5296 true Chr10: 43998634-44003929 Phaseolus vulgaris
Phvul.010G161900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44001930-44003929 Phaseolus vulgaris
Phvul.010G161900 2.0kb downstream 2.0kb downstream 5296 true Chr10: 43996634-44001929 Phaseolus vulgaris
Phvul.010G161900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43996634-43998633 Phaseolus vulgaris
Phvul.010G161900 5.0kb upstream 5.0kb upstream 8296 true Chr10: 43998634-44006929 Phaseolus vulgaris
Phvul.010G161900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44001930-44006929 Phaseolus vulgaris
Phvul.010G161900 5.0kb downstream 5.0kb downstream 8296 true Chr10: 43993634-44001929 Phaseolus vulgaris
Phvul.010G161900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43993634-43998633 Phaseolus vulgaris
Phvul.010G161900 10.0kb upstream 10.0kb upstream 13296 true Chr10: 43998634-44011929 Phaseolus vulgaris
Phvul.010G161900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44001930-44011929 Phaseolus vulgaris
Phvul.010G161900 10.0kb downstream 10.0kb downstream 13296 true Chr10: 43988634-44001929 Phaseolus vulgaris
Phvul.010G161900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43988634-43998633 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029445 5273 Angiosperm View MSA
122315786 5265 Fabidae View MSA
124041432 5270 Rosid View MSA
123756860 5271 Pentapetalae View MSA
122777963 5272 Eudicot View MSA
121298778 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22517 0.0 4.19571    
cufflinks 4.63207 0.0 13.6556   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.51687 0.0 10.7641    
cufflinks 0.30885 0.0 1.2073 Low  
cufflinks 1.89392 0.0 6.18053    
cufflinks 0.0764312 0.0 0.334356 Low  
cufflinks 0.0177747 0.0 0.0899977 Low Low
cufflinks 0.0276035 0.0 0.134075 Low Low
cufflinks 0.707501 0.0 2.56968    
cufflinks 1.85202 0.0 6.11236    

0 Strain