Gene : Phvul.006G102200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22595:SF62 - HEVEIN-LIKE PREPROPROTEIN Genomic Order:  1016
Name:  ? Phvul.006G102200 Secondary Identifier:  ? PAC:37171639
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G102200 0.5kb upstream 0.5kb upstream 2665 true Chr06: 21205965-21208629 Phaseolus vulgaris
Phvul.006G102200 0.5kb upstream 0.5kb upstream 500 false Chr06: 21205965-21206464 Phaseolus vulgaris
Phvul.006G102200 0.5kb downstream 0.5kb downstream 2665 true Chr06: 21206465-21209129 Phaseolus vulgaris
Phvul.006G102200 0.5kb downstream 0.5kb downstream 500 false Chr06: 21208630-21209129 Phaseolus vulgaris
Phvul.006G102200 1.0kb upstream 1.0kb upstream 3165 true Chr06: 21205465-21208629 Phaseolus vulgaris
Phvul.006G102200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21205465-21206464 Phaseolus vulgaris
Phvul.006G102200 1.0kb downstream 1.0kb downstream 3165 true Chr06: 21206465-21209629 Phaseolus vulgaris
Phvul.006G102200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21208630-21209629 Phaseolus vulgaris
Phvul.006G102200 2.0kb upstream 2.0kb upstream 4165 true Chr06: 21204465-21208629 Phaseolus vulgaris
Phvul.006G102200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21204465-21206464 Phaseolus vulgaris
Phvul.006G102200 2.0kb downstream 2.0kb downstream 4165 true Chr06: 21206465-21210629 Phaseolus vulgaris
Phvul.006G102200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21208630-21210629 Phaseolus vulgaris
Phvul.006G102200 5.0kb upstream 5.0kb upstream 7165 true Chr06: 21201465-21208629 Phaseolus vulgaris
Phvul.006G102200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21201465-21206464 Phaseolus vulgaris
Phvul.006G102200 5.0kb downstream 5.0kb downstream 7165 true Chr06: 21206465-21213629 Phaseolus vulgaris
Phvul.006G102200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21208630-21213629 Phaseolus vulgaris
Phvul.006G102200 10.0kb upstream 10.0kb upstream 12165 true Chr06: 21196465-21208629 Phaseolus vulgaris
Phvul.006G102200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21196465-21206464 Phaseolus vulgaris
Phvul.006G102200 10.0kb downstream 10.0kb downstream 12165 true Chr06: 21206465-21218629 Phaseolus vulgaris
Phvul.006G102200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21208630-21218629 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311692 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.9477 0.0 111.111 High High
cufflinks 43.7939 0.0 113.37 High High
cufflinks 11.6355 0.0 31.953    
cufflinks 40.2755 0.0 104.128 High High
cufflinks 23.0677 0.0 60.2658    
cufflinks 15.7815 0.0 42.1346    
cufflinks 10.2435 0.0 28.2532    
cufflinks 12.3651 0.0 33.5784    
cufflinks 7.36269 0.0 20.9396   Low
cufflinks 6.44955 0.0 18.6592   Low
cufflinks 27.1526 0.0 70.4425    

0 Strain