Gene : Phvul.006G102300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22595:SF62 - HEVEIN-LIKE PREPROPROTEIN Genomic Order:  1017
Name:  ? Phvul.006G102300 Secondary Identifier:  ? PAC:37171491
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G102300 0.5kb upstream 0.5kb upstream 1538 true Chr06: 21211736-21213273 Phaseolus vulgaris
Phvul.006G102300 0.5kb upstream 0.5kb upstream 500 false Chr06: 21211736-21212235 Phaseolus vulgaris
Phvul.006G102300 0.5kb downstream 0.5kb downstream 1538 true Chr06: 21212236-21213773 Phaseolus vulgaris
Phvul.006G102300 0.5kb downstream 0.5kb downstream 500 false Chr06: 21213274-21213773 Phaseolus vulgaris
Phvul.006G102300 1.0kb upstream 1.0kb upstream 2038 true Chr06: 21211236-21213273 Phaseolus vulgaris
Phvul.006G102300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21211236-21212235 Phaseolus vulgaris
Phvul.006G102300 1.0kb downstream 1.0kb downstream 2038 true Chr06: 21212236-21214273 Phaseolus vulgaris
Phvul.006G102300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21213274-21214273 Phaseolus vulgaris
Phvul.006G102300 2.0kb upstream 2.0kb upstream 3038 true Chr06: 21210236-21213273 Phaseolus vulgaris
Phvul.006G102300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21210236-21212235 Phaseolus vulgaris
Phvul.006G102300 2.0kb downstream 2.0kb downstream 3038 true Chr06: 21212236-21215273 Phaseolus vulgaris
Phvul.006G102300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21213274-21215273 Phaseolus vulgaris
Phvul.006G102300 5.0kb upstream 5.0kb upstream 6038 true Chr06: 21207236-21213273 Phaseolus vulgaris
Phvul.006G102300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21207236-21212235 Phaseolus vulgaris
Phvul.006G102300 5.0kb downstream 5.0kb downstream 6038 true Chr06: 21212236-21218273 Phaseolus vulgaris
Phvul.006G102300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21213274-21218273 Phaseolus vulgaris
Phvul.006G102300 10.0kb upstream 10.0kb upstream 11038 true Chr06: 21202236-21213273 Phaseolus vulgaris
Phvul.006G102300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21202236-21212235 Phaseolus vulgaris
Phvul.006G102300 10.0kb downstream 10.0kb downstream 11038 true Chr06: 21212236-21223273 Phaseolus vulgaris
Phvul.006G102300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21213274-21223273 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311692 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.2073 0.0 121.146 High High
cufflinks 28.3621 0.0 76.6672   High
cufflinks 1.48485 0.0 5.47616   Low
cufflinks 30.3864 0.0 81.821   High
cufflinks 4.52213 0.0 14.87    
cufflinks 8.80872 0.0 26.7757    
cufflinks 2.99053 0.0 10.2363    
cufflinks 9.91127 0.0 29.592    
cufflinks 1.04037 0.0 3.93527   Low
cufflinks 10.537 0.0 31.4465    
cufflinks 15.1135 0.0 43.2908    

0 Strain