Gene : Phvul.010G161700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC Genomic Order:  1628
Name:  ? Phvul.010G161700 Secondary Identifier:  ? PAC:37143392
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G161700 0.5kb upstream 0.5kb upstream 4529 true Chr10: 43988863-43993391 Phaseolus vulgaris
Phvul.010G161700 0.5kb upstream 0.5kb upstream 500 false Chr10: 43988863-43989362 Phaseolus vulgaris
Phvul.010G161700 0.5kb downstream 0.5kb downstream 4529 true Chr10: 43989363-43993891 Phaseolus vulgaris
Phvul.010G161700 0.5kb downstream 0.5kb downstream 500 false Chr10: 43993392-43993891 Phaseolus vulgaris
Phvul.010G161700 1.0kb upstream 1.0kb upstream 5029 true Chr10: 43988363-43993391 Phaseolus vulgaris
Phvul.010G161700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43988363-43989362 Phaseolus vulgaris
Phvul.010G161700 1.0kb downstream 1.0kb downstream 5029 true Chr10: 43989363-43994391 Phaseolus vulgaris
Phvul.010G161700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43993392-43994391 Phaseolus vulgaris
Phvul.010G161700 2.0kb upstream 2.0kb upstream 6029 true Chr10: 43987363-43993391 Phaseolus vulgaris
Phvul.010G161700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43987363-43989362 Phaseolus vulgaris
Phvul.010G161700 2.0kb downstream 2.0kb downstream 6029 true Chr10: 43989363-43995391 Phaseolus vulgaris
Phvul.010G161700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43993392-43995391 Phaseolus vulgaris
Phvul.010G161700 5.0kb upstream 5.0kb upstream 9029 true Chr10: 43984363-43993391 Phaseolus vulgaris
Phvul.010G161700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43984363-43989362 Phaseolus vulgaris
Phvul.010G161700 5.0kb downstream 5.0kb downstream 9029 true Chr10: 43989363-43998391 Phaseolus vulgaris
Phvul.010G161700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43993392-43998391 Phaseolus vulgaris
Phvul.010G161700 10.0kb upstream 10.0kb upstream 14029 true Chr10: 43979363-43993391 Phaseolus vulgaris
Phvul.010G161700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43979363-43989362 Phaseolus vulgaris
Phvul.010G161700 10.0kb downstream 10.0kb downstream 14029 true Chr10: 43989363-44003391 Phaseolus vulgaris
Phvul.010G161700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43993392-44003391 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301044 5265 Fabidae View MSA
124062397 5270 Rosid View MSA
123740015 5271 Pentapetalae View MSA
122790837 5272 Eudicot View MSA
122045493 5273 Angiosperm View MSA
121344833 5274 Embryophyte View MSA
123428835 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2555 0.0 40.7737    
cufflinks 19.6171 0.0 51.6059    
cufflinks 112.679 0.0 309.575 High High
cufflinks 15.7606 0.0 42.0689    
cufflinks 21.4293 0.0 56.1997    
cufflinks 45.4033 0.0 117.624 High  
cufflinks 1.57222 0.0 5.33525   Low
cufflinks 1.8112 0.0 6.0295   Low
cufflinks 2.82849 0.0 9.00156   Low
cufflinks 30.1877 0.0 78.1412    
cufflinks 10.4287 0.0 28.8651    

0 Strain