Gene : Phvul.006G100800 P. vulgaris v2.1
Defline:  (1 of 1) K01456 - peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase (E3.5.1.52, NGLY1, PNG1) Genomic Order:  1003
Name:  ? Phvul.006G100800 Secondary Identifier:  ? PAC:37172004
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G100800 0.5kb upstream 0.5kb upstream 7727 true Chr06: 21101379-21109105 Phaseolus vulgaris
Phvul.006G100800 0.5kb upstream 0.5kb upstream 500 false Chr06: 21108606-21109105 Phaseolus vulgaris
Phvul.006G100800 0.5kb downstream 0.5kb downstream 7727 true Chr06: 21100879-21108605 Phaseolus vulgaris
Phvul.006G100800 0.5kb downstream 0.5kb downstream 500 false Chr06: 21100879-21101378 Phaseolus vulgaris
Phvul.006G100800 1.0kb upstream 1.0kb upstream 8227 true Chr06: 21101379-21109605 Phaseolus vulgaris
Phvul.006G100800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21108606-21109605 Phaseolus vulgaris
Phvul.006G100800 1.0kb downstream 1.0kb downstream 8227 true Chr06: 21100379-21108605 Phaseolus vulgaris
Phvul.006G100800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21100379-21101378 Phaseolus vulgaris
Phvul.006G100800 2.0kb upstream 2.0kb upstream 9227 true Chr06: 21101379-21110605 Phaseolus vulgaris
Phvul.006G100800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21108606-21110605 Phaseolus vulgaris
Phvul.006G100800 2.0kb downstream 2.0kb downstream 9227 true Chr06: 21099379-21108605 Phaseolus vulgaris
Phvul.006G100800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21099379-21101378 Phaseolus vulgaris
Phvul.006G100800 5.0kb upstream 5.0kb upstream 12227 true Chr06: 21101379-21113605 Phaseolus vulgaris
Phvul.006G100800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21108606-21113605 Phaseolus vulgaris
Phvul.006G100800 5.0kb downstream 5.0kb downstream 12227 true Chr06: 21096379-21108605 Phaseolus vulgaris
Phvul.006G100800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21096379-21101378 Phaseolus vulgaris
Phvul.006G100800 10.0kb upstream 10.0kb upstream 17227 true Chr06: 21101379-21118605 Phaseolus vulgaris
Phvul.006G100800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21108606-21118605 Phaseolus vulgaris
Phvul.006G100800 10.0kb downstream 10.0kb downstream 17227 true Chr06: 21091379-21108605 Phaseolus vulgaris
Phvul.006G100800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21091379-21101378 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302619 5265 Fabidae View MSA
124067325 5270 Rosid View MSA
123748709 5271 Pentapetalae View MSA
122792464 5272 Eudicot View MSA
122051116 5273 Angiosperm View MSA
121344308 5274 Embryophyte View MSA
123425533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9213 0.0 41.1795    
cufflinks 13.8589 0.0 35.9503    
cufflinks 16.4571 0.0 42.5592    
cufflinks 14.019 0.0 36.388    
cufflinks 13.5962 0.0 35.3526   Low
cufflinks 25.2766 0.0 65.6281   High
cufflinks 17.4405 0.0 45.0849    
cufflinks 15.9783 0.0 41.324    
cufflinks 16.5659 0.0 42.8446    
cufflinks 25.5065 0.0 66.2383   High
cufflinks 15.7396 0.0 40.7541    

0 Strain