Gene : Phvul.010G160100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21094:SF1 - GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  1612
Name:  ? Phvul.010G160100 Secondary Identifier:  ? PAC:37142651
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G160100 0.5kb upstream 0.5kb upstream 4528 true Chr10: 43874747-43879274 Phaseolus vulgaris
Phvul.010G160100 0.5kb upstream 0.5kb upstream 500 false Chr10: 43878775-43879274 Phaseolus vulgaris
Phvul.010G160100 0.5kb downstream 0.5kb downstream 4528 true Chr10: 43874247-43878774 Phaseolus vulgaris
Phvul.010G160100 0.5kb downstream 0.5kb downstream 500 false Chr10: 43874247-43874746 Phaseolus vulgaris
Phvul.010G160100 1.0kb upstream 1.0kb upstream 5028 true Chr10: 43874747-43879774 Phaseolus vulgaris
Phvul.010G160100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43878775-43879774 Phaseolus vulgaris
Phvul.010G160100 1.0kb downstream 1.0kb downstream 5028 true Chr10: 43873747-43878774 Phaseolus vulgaris
Phvul.010G160100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43873747-43874746 Phaseolus vulgaris
Phvul.010G160100 2.0kb upstream 2.0kb upstream 6028 true Chr10: 43874747-43880774 Phaseolus vulgaris
Phvul.010G160100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43878775-43880774 Phaseolus vulgaris
Phvul.010G160100 2.0kb downstream 2.0kb downstream 6028 true Chr10: 43872747-43878774 Phaseolus vulgaris
Phvul.010G160100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43872747-43874746 Phaseolus vulgaris
Phvul.010G160100 5.0kb upstream 5.0kb upstream 9028 true Chr10: 43874747-43883774 Phaseolus vulgaris
Phvul.010G160100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43878775-43883774 Phaseolus vulgaris
Phvul.010G160100 5.0kb downstream 5.0kb downstream 9028 true Chr10: 43869747-43878774 Phaseolus vulgaris
Phvul.010G160100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43869747-43874746 Phaseolus vulgaris
Phvul.010G160100 10.0kb upstream 10.0kb upstream 14028 true Chr10: 43874747-43888774 Phaseolus vulgaris
Phvul.010G160100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43878775-43888774 Phaseolus vulgaris
Phvul.010G160100 10.0kb downstream 10.0kb downstream 14028 true Chr10: 43864747-43878774 Phaseolus vulgaris
Phvul.010G160100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43864747-43874746 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310974 5265 Fabidae View MSA
124071161 5270 Rosid View MSA
123751408 5271 Pentapetalae View MSA
122787730 5272 Eudicot View MSA
122044900 5273 Angiosperm View MSA
121348787 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.8313 0.0 188.967 High High
cufflinks 12.9634 0.0 36.4152    
cufflinks 13.2761 0.0 37.1263    
cufflinks 29.0562 0.0 76.5833    
cufflinks 15.0218 0.0 41.857    
cufflinks 10.7546 0.0 30.7738    
cufflinks 12.9781 0.0 36.423    
cufflinks 11.094 0.0 31.4771    
cufflinks 12.9714 0.0 36.3954    
cufflinks 13.8534 0.0 38.7199    
cufflinks 19.7404 0.0 53.6396    

0 Strain