Gene : Phvul.006G100700 P. vulgaris v2.1
Defline:  (1 of 72) PF02362 - B3 DNA binding domain (B3) Genomic Order:  1002
Name:  ? Phvul.006G100700 Secondary Identifier:  ? PAC:37173783
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G100700 0.5kb upstream 0.5kb upstream 2617 true Chr06: 21098699-21101315 Phaseolus vulgaris
Phvul.006G100700 0.5kb upstream 0.5kb upstream 500 false Chr06: 21098699-21099198 Phaseolus vulgaris
Phvul.006G100700 0.5kb downstream 0.5kb downstream 2617 true Chr06: 21099199-21101815 Phaseolus vulgaris
Phvul.006G100700 0.5kb downstream 0.5kb downstream 500 false Chr06: 21101316-21101815 Phaseolus vulgaris
Phvul.006G100700 1.0kb upstream 1.0kb upstream 3117 true Chr06: 21098199-21101315 Phaseolus vulgaris
Phvul.006G100700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21098199-21099198 Phaseolus vulgaris
Phvul.006G100700 1.0kb downstream 1.0kb downstream 3117 true Chr06: 21099199-21102315 Phaseolus vulgaris
Phvul.006G100700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21101316-21102315 Phaseolus vulgaris
Phvul.006G100700 2.0kb upstream 2.0kb upstream 4117 true Chr06: 21097199-21101315 Phaseolus vulgaris
Phvul.006G100700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21097199-21099198 Phaseolus vulgaris
Phvul.006G100700 2.0kb downstream 2.0kb downstream 4117 true Chr06: 21099199-21103315 Phaseolus vulgaris
Phvul.006G100700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21101316-21103315 Phaseolus vulgaris
Phvul.006G100700 5.0kb upstream 5.0kb upstream 7117 true Chr06: 21094199-21101315 Phaseolus vulgaris
Phvul.006G100700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21094199-21099198 Phaseolus vulgaris
Phvul.006G100700 5.0kb downstream 5.0kb downstream 7117 true Chr06: 21099199-21106315 Phaseolus vulgaris
Phvul.006G100700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21101316-21106315 Phaseolus vulgaris
Phvul.006G100700 10.0kb upstream 10.0kb upstream 12117 true Chr06: 21089199-21101315 Phaseolus vulgaris
Phvul.006G100700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21089199-21099198 Phaseolus vulgaris
Phvul.006G100700 10.0kb downstream 10.0kb downstream 12117 true Chr06: 21099199-21111315 Phaseolus vulgaris
Phvul.006G100700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21101316-21111315 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312850 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123017 0.0 0.518341 Low  
cufflinks 0.141777 0.0 0.591571 Low  
cufflinks 0.0883929 0.0 0.385259 Low  
cufflinks 0.10129 0.0 0.439239 Low  
cufflinks 0.184285 0.0 0.75843 Low  
cufflinks 0.292814 0.0 1.15269 Low  
cufflinks 0.466573 0.0 1.76701 Low  
cufflinks 3.12805 0.0 9.69325   High
cufflinks 0.152789 0.0 0.633743 Low  
cufflinks 0.161241 0.0 0.666813 Low  
cufflinks 1.05209 0.0 3.73344   High

0 Strain