Gene : Phvul.006G101400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11730//PTHR11730:SF47 - AMMONIUM TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1008
Name:  ? Phvul.006G101400 Secondary Identifier:  ? PAC:37171900
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G101400 0.5kb upstream 0.5kb upstream 2154 true Chr06: 21152357-21154510 Phaseolus vulgaris
Phvul.006G101400 0.5kb upstream 0.5kb upstream 500 false Chr06: 21152357-21152856 Phaseolus vulgaris
Phvul.006G101400 0.5kb downstream 0.5kb downstream 2154 true Chr06: 21152857-21155010 Phaseolus vulgaris
Phvul.006G101400 0.5kb downstream 0.5kb downstream 500 false Chr06: 21154511-21155010 Phaseolus vulgaris
Phvul.006G101400 1.0kb upstream 1.0kb upstream 2654 true Chr06: 21151857-21154510 Phaseolus vulgaris
Phvul.006G101400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21151857-21152856 Phaseolus vulgaris
Phvul.006G101400 1.0kb downstream 1.0kb downstream 2654 true Chr06: 21152857-21155510 Phaseolus vulgaris
Phvul.006G101400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21154511-21155510 Phaseolus vulgaris
Phvul.006G101400 2.0kb upstream 2.0kb upstream 3654 true Chr06: 21150857-21154510 Phaseolus vulgaris
Phvul.006G101400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21150857-21152856 Phaseolus vulgaris
Phvul.006G101400 2.0kb downstream 2.0kb downstream 3654 true Chr06: 21152857-21156510 Phaseolus vulgaris
Phvul.006G101400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21154511-21156510 Phaseolus vulgaris
Phvul.006G101400 5.0kb upstream 5.0kb upstream 6654 true Chr06: 21147857-21154510 Phaseolus vulgaris
Phvul.006G101400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21147857-21152856 Phaseolus vulgaris
Phvul.006G101400 5.0kb downstream 5.0kb downstream 6654 true Chr06: 21152857-21159510 Phaseolus vulgaris
Phvul.006G101400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21154511-21159510 Phaseolus vulgaris
Phvul.006G101400 10.0kb upstream 10.0kb upstream 11654 true Chr06: 21142857-21154510 Phaseolus vulgaris
Phvul.006G101400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21142857-21152856 Phaseolus vulgaris
Phvul.006G101400 10.0kb downstream 10.0kb downstream 11654 true Chr06: 21152857-21164510 Phaseolus vulgaris
Phvul.006G101400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21154511-21164510 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296554 5265 Fabidae View MSA
124070056 5270 Rosid View MSA
123744149 5271 Pentapetalae View MSA
122795820 5272 Eudicot View MSA
122048478 5273 Angiosperm View MSA
121310983 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.157312 0.0 0.631507 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0189764 0.0 0.0929371 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0272966 0.0 0.128962 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain