Gene : Phvul.010G163700 P. vulgaris v2.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  1650
Name:  ? Phvul.010G163700 Secondary Identifier:  ? PAC:37142293
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2541 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G163700 0.5kb upstream 0.5kb upstream 5494 true Chr10: 44104988-44110481 Phaseolus vulgaris
Phvul.010G163700 0.5kb upstream 0.5kb upstream 500 false Chr10: 44104988-44105487 Phaseolus vulgaris
Phvul.010G163700 0.5kb downstream 0.5kb downstream 5494 true Chr10: 44105488-44110981 Phaseolus vulgaris
Phvul.010G163700 0.5kb downstream 0.5kb downstream 500 false Chr10: 44110482-44110981 Phaseolus vulgaris
Phvul.010G163700 1.0kb upstream 1.0kb upstream 5994 true Chr10: 44104488-44110481 Phaseolus vulgaris
Phvul.010G163700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44104488-44105487 Phaseolus vulgaris
Phvul.010G163700 1.0kb downstream 1.0kb downstream 5994 true Chr10: 44105488-44111481 Phaseolus vulgaris
Phvul.010G163700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44110482-44111481 Phaseolus vulgaris
Phvul.010G163700 2.0kb upstream 2.0kb upstream 6994 true Chr10: 44103488-44110481 Phaseolus vulgaris
Phvul.010G163700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44103488-44105487 Phaseolus vulgaris
Phvul.010G163700 2.0kb downstream 2.0kb downstream 6994 true Chr10: 44105488-44112481 Phaseolus vulgaris
Phvul.010G163700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44110482-44112481 Phaseolus vulgaris
Phvul.010G163700 5.0kb upstream 5.0kb upstream 9994 true Chr10: 44100488-44110481 Phaseolus vulgaris
Phvul.010G163700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44100488-44105487 Phaseolus vulgaris
Phvul.010G163700 5.0kb downstream 5.0kb downstream 9994 true Chr10: 44105488-44115481 Phaseolus vulgaris
Phvul.010G163700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44110482-44115481 Phaseolus vulgaris
Phvul.010G163700 10.0kb upstream 10.0kb upstream 14994 true Chr10: 44095488-44110481 Phaseolus vulgaris
Phvul.010G163700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44095488-44105487 Phaseolus vulgaris
Phvul.010G163700 10.0kb downstream 10.0kb downstream 14994 true Chr10: 44105488-44120481 Phaseolus vulgaris
Phvul.010G163700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44110482-44120481 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308667 5265 Fabidae View MSA
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9252 0.0 46.3956   Low
cufflinks 25.9393 0.0 67.1449    
cufflinks 22.8934 0.0 59.1944    
cufflinks 37.128 0.0 97.0137 High High
cufflinks 19.8705 0.0 51.4186    
cufflinks 24.1967 0.0 62.5841    
cufflinks 19.3276 0.0 49.9979    
cufflinks 19.5341 0.0 50.5001    
cufflinks 26.6699 0.0 69.0186    
cufflinks 17.465 0.0 45.238   Low
cufflinks 24.6276 0.0 63.6729    

0 Strain