Gene : Phvul.010G164900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31998:SF11 - PYROPHOSPHATE-ENERGIZED MEMBRANE PROTON PUMP 2-RELATED Genomic Order:  1661
Name:  ? Phvul.010G164900 Secondary Identifier:  ? PAC:37142385
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G164900 0.5kb upstream 0.5kb upstream 10018 true Chr10: 44168764-44178781 Phaseolus vulgaris
Phvul.010G164900 0.5kb upstream 0.5kb upstream 500 false Chr10: 44178282-44178781 Phaseolus vulgaris
Phvul.010G164900 0.5kb downstream 0.5kb downstream 10018 true Chr10: 44168264-44178281 Phaseolus vulgaris
Phvul.010G164900 0.5kb downstream 0.5kb downstream 500 false Chr10: 44168264-44168763 Phaseolus vulgaris
Phvul.010G164900 1.0kb upstream 1.0kb upstream 10518 true Chr10: 44168764-44179281 Phaseolus vulgaris
Phvul.010G164900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44178282-44179281 Phaseolus vulgaris
Phvul.010G164900 1.0kb downstream 1.0kb downstream 10518 true Chr10: 44167764-44178281 Phaseolus vulgaris
Phvul.010G164900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44167764-44168763 Phaseolus vulgaris
Phvul.010G164900 2.0kb upstream 2.0kb upstream 11518 true Chr10: 44168764-44180281 Phaseolus vulgaris
Phvul.010G164900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44178282-44180281 Phaseolus vulgaris
Phvul.010G164900 2.0kb downstream 2.0kb downstream 11518 true Chr10: 44166764-44178281 Phaseolus vulgaris
Phvul.010G164900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44166764-44168763 Phaseolus vulgaris
Phvul.010G164900 5.0kb upstream 5.0kb upstream 14518 true Chr10: 44168764-44183281 Phaseolus vulgaris
Phvul.010G164900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44178282-44183281 Phaseolus vulgaris
Phvul.010G164900 5.0kb downstream 5.0kb downstream 14518 true Chr10: 44163764-44178281 Phaseolus vulgaris
Phvul.010G164900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44163764-44168763 Phaseolus vulgaris
Phvul.010G164900 10.0kb upstream 10.0kb upstream 19518 true Chr10: 44168764-44188281 Phaseolus vulgaris
Phvul.010G164900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44178282-44188281 Phaseolus vulgaris
Phvul.010G164900 10.0kb downstream 10.0kb downstream 19518 true Chr10: 44158764-44178281 Phaseolus vulgaris
Phvul.010G164900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44158764-44168763 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302048 5265 Fabidae View MSA
124067461 5270 Rosid View MSA
123745513 5271 Pentapetalae View MSA
122786142 5272 Eudicot View MSA
122044345 5273 Angiosperm View MSA
121350028 5274 Embryophyte View MSA
123424450 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0578 0.0 54.8831   Low
cufflinks 37.8644 0.0 102.536 High  
cufflinks 26.5779 0.0 70.0808   Low
cufflinks 33.3943 0.0 88.9925    
cufflinks 36.5576 0.0 98.4164 High  
cufflinks 27.3219 0.0 72.1233    
cufflinks 34.743 0.0 93.2797 High  
cufflinks 33.9633 0.0 91.2369 High  
cufflinks 41.9755 0.0 114.282 High High
cufflinks 34.4158 0.0 92.4138    
cufflinks 41.0826 0.0 111.801 High High

0 Strain