Gene : Phvul.010G164300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10759//PTHR10759:SF4 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  1656
Name:  ? Phvul.010G164300 Secondary Identifier:  ? PAC:37143280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G164300 0.5kb upstream 0.5kb upstream 4330 true Chr10: 44133325-44137654 Phaseolus vulgaris
Phvul.010G164300 0.5kb upstream 0.5kb upstream 500 false Chr10: 44133325-44133824 Phaseolus vulgaris
Phvul.010G164300 0.5kb downstream 0.5kb downstream 4330 true Chr10: 44133825-44138154 Phaseolus vulgaris
Phvul.010G164300 0.5kb downstream 0.5kb downstream 500 false Chr10: 44137655-44138154 Phaseolus vulgaris
Phvul.010G164300 1.0kb upstream 1.0kb upstream 4830 true Chr10: 44132825-44137654 Phaseolus vulgaris
Phvul.010G164300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44132825-44133824 Phaseolus vulgaris
Phvul.010G164300 1.0kb downstream 1.0kb downstream 4830 true Chr10: 44133825-44138654 Phaseolus vulgaris
Phvul.010G164300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44137655-44138654 Phaseolus vulgaris
Phvul.010G164300 2.0kb upstream 2.0kb upstream 5830 true Chr10: 44131825-44137654 Phaseolus vulgaris
Phvul.010G164300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44131825-44133824 Phaseolus vulgaris
Phvul.010G164300 2.0kb downstream 2.0kb downstream 5830 true Chr10: 44133825-44139654 Phaseolus vulgaris
Phvul.010G164300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44137655-44139654 Phaseolus vulgaris
Phvul.010G164300 5.0kb upstream 5.0kb upstream 8830 true Chr10: 44128825-44137654 Phaseolus vulgaris
Phvul.010G164300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44128825-44133824 Phaseolus vulgaris
Phvul.010G164300 5.0kb downstream 5.0kb downstream 8830 true Chr10: 44133825-44142654 Phaseolus vulgaris
Phvul.010G164300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44137655-44142654 Phaseolus vulgaris
Phvul.010G164300 10.0kb upstream 10.0kb upstream 13830 true Chr10: 44123825-44137654 Phaseolus vulgaris
Phvul.010G164300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44123825-44133824 Phaseolus vulgaris
Phvul.010G164300 10.0kb downstream 10.0kb downstream 13830 true Chr10: 44133825-44147654 Phaseolus vulgaris
Phvul.010G164300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44137655-44147654 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299685 5265 Fabidae View MSA
124064298 5270 Rosid View MSA
123747656 5271 Pentapetalae View MSA
122792050 5272 Eudicot View MSA
122050255 5273 Angiosperm View MSA
121311827 5274 Embryophyte View MSA
123349068 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15932 0.0 6.63027    
cufflinks 5.52523 0.0 15.397    
cufflinks 1.01491 0.0 3.39789    
cufflinks 1.59171 0.0 5.12538    
cufflinks 3.31239 0.0 9.80043    
cufflinks 3.44311 0.0 10.0383    
cufflinks 2.53504 0.0 7.63317    
cufflinks 3.16142 0.0 9.27119    
cufflinks 2.75369 0.0 8.23769    
cufflinks 0.122813 0.0 0.498744 Low Low
cufflinks 3.84865 0.0 11.1565    

0 Strain