Gene : Phvul.006G103500 P. vulgaris v2.1
Defline:  (1 of 13) PF04576 - Zein-binding (Zein-binding) Genomic Order:  1028
Name:  ? Phvul.006G103500 Secondary Identifier:  ? PAC:37171877
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G103500 0.5kb upstream 0.5kb upstream 5611 true Chr06: 21291191-21296801 Phaseolus vulgaris
Phvul.006G103500 0.5kb upstream 0.5kb upstream 500 false Chr06: 21291191-21291690 Phaseolus vulgaris
Phvul.006G103500 0.5kb downstream 0.5kb downstream 5611 true Chr06: 21291691-21297301 Phaseolus vulgaris
Phvul.006G103500 0.5kb downstream 0.5kb downstream 500 false Chr06: 21296802-21297301 Phaseolus vulgaris
Phvul.006G103500 1.0kb upstream 1.0kb upstream 6111 true Chr06: 21290691-21296801 Phaseolus vulgaris
Phvul.006G103500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21290691-21291690 Phaseolus vulgaris
Phvul.006G103500 1.0kb downstream 1.0kb downstream 6111 true Chr06: 21291691-21297801 Phaseolus vulgaris
Phvul.006G103500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21296802-21297801 Phaseolus vulgaris
Phvul.006G103500 2.0kb upstream 2.0kb upstream 7111 true Chr06: 21289691-21296801 Phaseolus vulgaris
Phvul.006G103500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21289691-21291690 Phaseolus vulgaris
Phvul.006G103500 2.0kb downstream 2.0kb downstream 7111 true Chr06: 21291691-21298801 Phaseolus vulgaris
Phvul.006G103500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21296802-21298801 Phaseolus vulgaris
Phvul.006G103500 5.0kb upstream 5.0kb upstream 10111 true Chr06: 21286691-21296801 Phaseolus vulgaris
Phvul.006G103500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21286691-21291690 Phaseolus vulgaris
Phvul.006G103500 5.0kb downstream 5.0kb downstream 10111 true Chr06: 21291691-21301801 Phaseolus vulgaris
Phvul.006G103500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21296802-21301801 Phaseolus vulgaris
Phvul.006G103500 10.0kb upstream 10.0kb upstream 15111 true Chr06: 21281691-21296801 Phaseolus vulgaris
Phvul.006G103500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21281691-21291690 Phaseolus vulgaris
Phvul.006G103500 10.0kb downstream 10.0kb downstream 15111 true Chr06: 21291691-21306801 Phaseolus vulgaris
Phvul.006G103500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21296802-21306801 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305379 5265 Fabidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30484 0.0 11.0936   Low
cufflinks 4.09316 0.0 17.2263    
cufflinks 4.50352 0.0 18.3023    
cufflinks 3.46408 0.0 11.7809   Low
cufflinks 5.72005 0.0 22.7526    
cufflinks 4.41256 0.0 18.3113    
cufflinks 8.67975 0.0 31.7314   High
cufflinks 4.91354 0.0 19.8368    
cufflinks 10.8575 0.0 38.8622   High
cufflinks 8.66117 0.0 31.7185   High
cufflinks 6.64204 0.0 22.9662    

0 Strain