Gene : Phvul.010G163400 P. vulgaris v2.1
Defline:  (1 of 3) PF02325 - YGGT family (YGGT) Genomic Order:  1647
Name:  ? Phvul.010G163400 Secondary Identifier:  ? PAC:37142132
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G163400 0.5kb upstream 0.5kb upstream 1514 true Chr10: 44091308-44092821 Phaseolus vulgaris
Phvul.010G163400 0.5kb upstream 0.5kb upstream 500 false Chr10: 44091308-44091807 Phaseolus vulgaris
Phvul.010G163400 0.5kb downstream 0.5kb downstream 1514 true Chr10: 44091808-44093321 Phaseolus vulgaris
Phvul.010G163400 0.5kb downstream 0.5kb downstream 500 false Chr10: 44092822-44093321 Phaseolus vulgaris
Phvul.010G163400 1.0kb upstream 1.0kb upstream 2014 true Chr10: 44090808-44092821 Phaseolus vulgaris
Phvul.010G163400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44090808-44091807 Phaseolus vulgaris
Phvul.010G163400 1.0kb downstream 1.0kb downstream 2014 true Chr10: 44091808-44093821 Phaseolus vulgaris
Phvul.010G163400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44092822-44093821 Phaseolus vulgaris
Phvul.010G163400 2.0kb upstream 2.0kb upstream 3014 true Chr10: 44089808-44092821 Phaseolus vulgaris
Phvul.010G163400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44089808-44091807 Phaseolus vulgaris
Phvul.010G163400 2.0kb downstream 2.0kb downstream 3014 true Chr10: 44091808-44094821 Phaseolus vulgaris
Phvul.010G163400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44092822-44094821 Phaseolus vulgaris
Phvul.010G163400 5.0kb upstream 5.0kb upstream 6014 true Chr10: 44086808-44092821 Phaseolus vulgaris
Phvul.010G163400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44086808-44091807 Phaseolus vulgaris
Phvul.010G163400 5.0kb downstream 5.0kb downstream 6014 true Chr10: 44091808-44097821 Phaseolus vulgaris
Phvul.010G163400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44092822-44097821 Phaseolus vulgaris
Phvul.010G163400 10.0kb upstream 10.0kb upstream 11014 true Chr10: 44081808-44092821 Phaseolus vulgaris
Phvul.010G163400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44081808-44091807 Phaseolus vulgaris
Phvul.010G163400 10.0kb downstream 10.0kb downstream 11014 true Chr10: 44091808-44102821 Phaseolus vulgaris
Phvul.010G163400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44092822-44102821 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309420 5265 Fabidae View MSA
124073194 5270 Rosid View MSA
123747708 5271 Pentapetalae View MSA
122788477 5272 Eudicot View MSA
122044602 5273 Angiosperm View MSA
121348481 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 132.391 0.0 355.411 High  
cufflinks 126.783 0.0 338.896 High  
cufflinks 250.264 0.0 710.197 High High
cufflinks 172.404 0.0 480.424 High  
cufflinks 120.043 0.0 322.151 High  
cufflinks 121.585 0.0 323.131 High  
cufflinks 30.0322 0.0 78.5698 High Low
cufflinks 42.5983 0.0 110.448 High Low
cufflinks 52.1857 0.0 134.89 High Low
cufflinks 127.508 0.0 341.812 High  
cufflinks 98.7706 0.0 260.932 High  

0 Strain