Gene : Phvul.006G090500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22939:SF95 - SERINE PROTEASE HTRA2, MITOCHONDRIAL Genomic Order:  896
Name:  ? Phvul.006G090500 Secondary Identifier:  ? PAC:37171465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G090500 0.5kb upstream 0.5kb upstream 5236 true Chr06: 20194405-20199640 Phaseolus vulgaris
Phvul.006G090500 0.5kb upstream 0.5kb upstream 500 false Chr06: 20194405-20194904 Phaseolus vulgaris
Phvul.006G090500 0.5kb downstream 0.5kb downstream 5236 true Chr06: 20194905-20200140 Phaseolus vulgaris
Phvul.006G090500 0.5kb downstream 0.5kb downstream 500 false Chr06: 20199641-20200140 Phaseolus vulgaris
Phvul.006G090500 1.0kb upstream 1.0kb upstream 5736 true Chr06: 20193905-20199640 Phaseolus vulgaris
Phvul.006G090500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20193905-20194904 Phaseolus vulgaris
Phvul.006G090500 1.0kb downstream 1.0kb downstream 5736 true Chr06: 20194905-20200640 Phaseolus vulgaris
Phvul.006G090500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20199641-20200640 Phaseolus vulgaris
Phvul.006G090500 2.0kb upstream 2.0kb upstream 6736 true Chr06: 20192905-20199640 Phaseolus vulgaris
Phvul.006G090500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20192905-20194904 Phaseolus vulgaris
Phvul.006G090500 2.0kb downstream 2.0kb downstream 6736 true Chr06: 20194905-20201640 Phaseolus vulgaris
Phvul.006G090500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20199641-20201640 Phaseolus vulgaris
Phvul.006G090500 5.0kb upstream 5.0kb upstream 9736 true Chr06: 20189905-20199640 Phaseolus vulgaris
Phvul.006G090500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20189905-20194904 Phaseolus vulgaris
Phvul.006G090500 5.0kb downstream 5.0kb downstream 9736 true Chr06: 20194905-20204640 Phaseolus vulgaris
Phvul.006G090500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20199641-20204640 Phaseolus vulgaris
Phvul.006G090500 10.0kb upstream 10.0kb upstream 14736 true Chr06: 20184905-20199640 Phaseolus vulgaris
Phvul.006G090500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20184905-20194904 Phaseolus vulgaris
Phvul.006G090500 10.0kb downstream 10.0kb downstream 14736 true Chr06: 20194905-20209640 Phaseolus vulgaris
Phvul.006G090500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20199641-20209640 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308433 5265 Fabidae View MSA
124065784 5270 Rosid View MSA
123744381 5271 Pentapetalae View MSA
122797059 5272 Eudicot View MSA
122045030 5273 Angiosperm View MSA
121344976 5274 Embryophyte View MSA
123424771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.82618 0.0 22.2252    
cufflinks 10.6515 0.0 34.1572   High
cufflinks 6.55753 0.0 23.9745    
cufflinks 12.1647 0.0 39.3601   High
cufflinks 7.79589 0.0 27.5586    
cufflinks 4.55787 0.0 18.1764   Low
cufflinks 5.29648 0.0 20.3021   Low
cufflinks 8.95133 0.0 30.2275    
cufflinks 5.49315 0.0 19.2968    
cufflinks 12.5223 0.0 40.0204   High
cufflinks 7.01588 0.0 25.4445    

0 Strain