Gene : Phvul.006G090200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11972:SF57 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN B Genomic Order:  893
Name:  ? Phvul.006G090200 Secondary Identifier:  ? PAC:37173486
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G090200 0.5kb upstream 0.5kb upstream 6581 true Chr06: 20167157-20173737 Phaseolus vulgaris
Phvul.006G090200 0.5kb upstream 0.5kb upstream 500 false Chr06: 20173238-20173737 Phaseolus vulgaris
Phvul.006G090200 0.5kb downstream 0.5kb downstream 6581 true Chr06: 20166657-20173237 Phaseolus vulgaris
Phvul.006G090200 0.5kb downstream 0.5kb downstream 500 false Chr06: 20166657-20167156 Phaseolus vulgaris
Phvul.006G090200 1.0kb upstream 1.0kb upstream 7081 true Chr06: 20167157-20174237 Phaseolus vulgaris
Phvul.006G090200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20173238-20174237 Phaseolus vulgaris
Phvul.006G090200 1.0kb downstream 1.0kb downstream 7081 true Chr06: 20166157-20173237 Phaseolus vulgaris
Phvul.006G090200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20166157-20167156 Phaseolus vulgaris
Phvul.006G090200 2.0kb upstream 2.0kb upstream 8081 true Chr06: 20167157-20175237 Phaseolus vulgaris
Phvul.006G090200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20173238-20175237 Phaseolus vulgaris
Phvul.006G090200 2.0kb downstream 2.0kb downstream 8081 true Chr06: 20165157-20173237 Phaseolus vulgaris
Phvul.006G090200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20165157-20167156 Phaseolus vulgaris
Phvul.006G090200 5.0kb upstream 5.0kb upstream 11081 true Chr06: 20167157-20178237 Phaseolus vulgaris
Phvul.006G090200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20173238-20178237 Phaseolus vulgaris
Phvul.006G090200 5.0kb downstream 5.0kb downstream 11081 true Chr06: 20162157-20173237 Phaseolus vulgaris
Phvul.006G090200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20162157-20167156 Phaseolus vulgaris
Phvul.006G090200 10.0kb upstream 10.0kb upstream 16081 true Chr06: 20167157-20183237 Phaseolus vulgaris
Phvul.006G090200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20173238-20183237 Phaseolus vulgaris
Phvul.006G090200 10.0kb downstream 10.0kb downstream 16081 true Chr06: 20157157-20173237 Phaseolus vulgaris
Phvul.006G090200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20157157-20167156 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310084 5265 Fabidae View MSA
124069385 5270 Rosid View MSA
123751204 5271 Pentapetalae View MSA
122794480 5272 Eudicot View MSA
122044435 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49916 0.0 4.53113    
cufflinks 2.4667 0.0 7.06014    
cufflinks 0.315804 0.0 1.13503 Low Low
cufflinks 0.373181 0.0 1.32222 Low Low
cufflinks 2.04391 0.0 5.97325    
cufflinks 1.20432 0.0 3.73704    
cufflinks 19.2602 0.0 50.2786   High
cufflinks 13.2228 0.0 34.1855   High
cufflinks 10.1809 0.0 26.3534    
cufflinks 6.88338 0.0 18.0975    
cufflinks 2.71502 0.0 7.69822    

0 Strain