Gene : Phvul.006G092500 P. vulgaris v2.1
Defline:  (1 of 4) KOG3114 - Uncharacterized conserved protein Genomic Order:  918
Name:  ? Phvul.006G092500 Secondary Identifier:  ? PAC:37172610
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G092500 0.5kb upstream 0.5kb upstream 5428 true Chr06: 20407929-20413356 Phaseolus vulgaris
Phvul.006G092500 0.5kb upstream 0.5kb upstream 500 false Chr06: 20407929-20408428 Phaseolus vulgaris
Phvul.006G092500 0.5kb downstream 0.5kb downstream 5428 true Chr06: 20408429-20413856 Phaseolus vulgaris
Phvul.006G092500 0.5kb downstream 0.5kb downstream 500 false Chr06: 20413357-20413856 Phaseolus vulgaris
Phvul.006G092500 1.0kb upstream 1.0kb upstream 5928 true Chr06: 20407429-20413356 Phaseolus vulgaris
Phvul.006G092500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20407429-20408428 Phaseolus vulgaris
Phvul.006G092500 1.0kb downstream 1.0kb downstream 5928 true Chr06: 20408429-20414356 Phaseolus vulgaris
Phvul.006G092500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20413357-20414356 Phaseolus vulgaris
Phvul.006G092500 2.0kb upstream 2.0kb upstream 6928 true Chr06: 20406429-20413356 Phaseolus vulgaris
Phvul.006G092500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20406429-20408428 Phaseolus vulgaris
Phvul.006G092500 2.0kb downstream 2.0kb downstream 6928 true Chr06: 20408429-20415356 Phaseolus vulgaris
Phvul.006G092500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20413357-20415356 Phaseolus vulgaris
Phvul.006G092500 5.0kb upstream 5.0kb upstream 9928 true Chr06: 20403429-20413356 Phaseolus vulgaris
Phvul.006G092500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20403429-20408428 Phaseolus vulgaris
Phvul.006G092500 5.0kb downstream 5.0kb downstream 9928 true Chr06: 20408429-20418356 Phaseolus vulgaris
Phvul.006G092500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20413357-20418356 Phaseolus vulgaris
Phvul.006G092500 10.0kb upstream 10.0kb upstream 14928 true Chr06: 20398429-20413356 Phaseolus vulgaris
Phvul.006G092500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20398429-20408428 Phaseolus vulgaris
Phvul.006G092500 10.0kb downstream 10.0kb downstream 14928 true Chr06: 20408429-20423356 Phaseolus vulgaris
Phvul.006G092500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20413357-20423356 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306811 5265 Fabidae View MSA
124062675 5270 Rosid View MSA
123739303 5271 Pentapetalae View MSA
122790193 5272 Eudicot View MSA
122045240 5273 Angiosperm View MSA
121344088 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3265 0.0 59.0246    
cufflinks 19.6959 0.0 52.4516    
cufflinks 21.0073 0.0 55.6102    
cufflinks 38.2416 0.0 99.0149 High High
cufflinks 25.3391 0.0 66.5144    
cufflinks 19.0573 0.0 50.8642    
cufflinks 18.6082 0.0 49.7854    
cufflinks 19.1378 0.0 50.892    
cufflinks 22.5002 0.0 59.5318    
cufflinks 18.4472 0.0 49.3942    
cufflinks 32.9306 0.0 85.513   High

0 Strain