Gene : Phvul.006G092400 P. vulgaris v2.1
Defline:  (1 of 1) KOG2974 - Uncharacterized conserved protein Genomic Order:  917
Name:  ? Phvul.006G092400 Secondary Identifier:  ? PAC:37172106
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G092400 0.5kb upstream 0.5kb upstream 3345 true Chr06: 20402445-20405789 Phaseolus vulgaris
Phvul.006G092400 0.5kb upstream 0.5kb upstream 500 false Chr06: 20402445-20402944 Phaseolus vulgaris
Phvul.006G092400 0.5kb downstream 0.5kb downstream 3345 true Chr06: 20402945-20406289 Phaseolus vulgaris
Phvul.006G092400 0.5kb downstream 0.5kb downstream 500 false Chr06: 20405790-20406289 Phaseolus vulgaris
Phvul.006G092400 1.0kb upstream 1.0kb upstream 3845 true Chr06: 20401945-20405789 Phaseolus vulgaris
Phvul.006G092400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20401945-20402944 Phaseolus vulgaris
Phvul.006G092400 1.0kb downstream 1.0kb downstream 3845 true Chr06: 20402945-20406789 Phaseolus vulgaris
Phvul.006G092400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20405790-20406789 Phaseolus vulgaris
Phvul.006G092400 2.0kb upstream 2.0kb upstream 4845 true Chr06: 20400945-20405789 Phaseolus vulgaris
Phvul.006G092400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20400945-20402944 Phaseolus vulgaris
Phvul.006G092400 2.0kb downstream 2.0kb downstream 4845 true Chr06: 20402945-20407789 Phaseolus vulgaris
Phvul.006G092400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20405790-20407789 Phaseolus vulgaris
Phvul.006G092400 5.0kb upstream 5.0kb upstream 7845 true Chr06: 20397945-20405789 Phaseolus vulgaris
Phvul.006G092400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20397945-20402944 Phaseolus vulgaris
Phvul.006G092400 5.0kb downstream 5.0kb downstream 7845 true Chr06: 20402945-20410789 Phaseolus vulgaris
Phvul.006G092400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20405790-20410789 Phaseolus vulgaris
Phvul.006G092400 10.0kb upstream 10.0kb upstream 12845 true Chr06: 20392945-20405789 Phaseolus vulgaris
Phvul.006G092400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20392945-20402944 Phaseolus vulgaris
Phvul.006G092400 10.0kb downstream 10.0kb downstream 12845 true Chr06: 20402945-20415789 Phaseolus vulgaris
Phvul.006G092400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20405790-20415789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303117 5265 Fabidae View MSA
124062711 5270 Rosid View MSA
123751289 5271 Pentapetalae View MSA
122787838 5272 Eudicot View MSA
122041859 5273 Angiosperm View MSA
121347805 5274 Embryophyte View MSA
123424872 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3448 0.0 30.6537    
cufflinks 15.8693 0.0 41.8227   High
cufflinks 12.0462 0.0 32.3377    
cufflinks 8.05956 0.0 22.5895   Low
cufflinks 9.21045 0.0 25.6432    
cufflinks 8.55181 0.0 23.6044   Low
cufflinks 14.6909 0.0 38.7451    
cufflinks 17.4443 0.0 45.503   High
cufflinks 12.6425 0.0 33.6882    
cufflinks 11.2402 0.0 30.4687    
cufflinks 11.2712 0.0 30.6053    

0 Strain