Gene : Phvul.010G149800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24089:SF270 - SOLUTE CARRIER FAMILY 25 MEMBER 48 Genomic Order:  1509
Name:  ? Phvul.010G149800 Secondary Identifier:  ? PAC:37144075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G149800 0.5kb upstream 0.5kb upstream 2340 true Chr10: 43026654-43028993 Phaseolus vulgaris
Phvul.010G149800 0.5kb upstream 0.5kb upstream 500 false Chr10: 43028494-43028993 Phaseolus vulgaris
Phvul.010G149800 0.5kb downstream 0.5kb downstream 2340 true Chr10: 43026154-43028493 Phaseolus vulgaris
Phvul.010G149800 0.5kb downstream 0.5kb downstream 500 false Chr10: 43026154-43026653 Phaseolus vulgaris
Phvul.010G149800 1.0kb upstream 1.0kb upstream 2840 true Chr10: 43026654-43029493 Phaseolus vulgaris
Phvul.010G149800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43028494-43029493 Phaseolus vulgaris
Phvul.010G149800 1.0kb downstream 1.0kb downstream 2840 true Chr10: 43025654-43028493 Phaseolus vulgaris
Phvul.010G149800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43025654-43026653 Phaseolus vulgaris
Phvul.010G149800 2.0kb upstream 2.0kb upstream 3840 true Chr10: 43026654-43030493 Phaseolus vulgaris
Phvul.010G149800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43028494-43030493 Phaseolus vulgaris
Phvul.010G149800 2.0kb downstream 2.0kb downstream 3840 true Chr10: 43024654-43028493 Phaseolus vulgaris
Phvul.010G149800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43024654-43026653 Phaseolus vulgaris
Phvul.010G149800 5.0kb upstream 5.0kb upstream 6840 true Chr10: 43026654-43033493 Phaseolus vulgaris
Phvul.010G149800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43028494-43033493 Phaseolus vulgaris
Phvul.010G149800 5.0kb downstream 5.0kb downstream 6840 true Chr10: 43021654-43028493 Phaseolus vulgaris
Phvul.010G149800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43021654-43026653 Phaseolus vulgaris
Phvul.010G149800 10.0kb upstream 10.0kb upstream 11840 true Chr10: 43026654-43038493 Phaseolus vulgaris
Phvul.010G149800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43028494-43038493 Phaseolus vulgaris
Phvul.010G149800 10.0kb downstream 10.0kb downstream 11840 true Chr10: 43016654-43028493 Phaseolus vulgaris
Phvul.010G149800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43016654-43026653 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310669 5265 Fabidae View MSA
124060460 5270 Rosid View MSA
123737609 5271 Pentapetalae View MSA
122793075 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.262029 0.0 1.03555 Low  
cufflinks 0.0222815 0.0 0.111288 Low Low
cufflinks 4.35865 0.0 13.0174   High
cufflinks 5.07006 0.0 15.0663   High
cufflinks 0.125293 0.0 0.528418 Low  
cufflinks 2.59105 0.0 8.21567    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.548288 0.0 2.0363    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.294462 0.0 1.15671 Low  

0 Strain