Gene : Phvul.010G148700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  1498
Name:  ? Phvul.010G148700 Secondary Identifier:  ? PAC:37142857
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G148700 0.5kb upstream 0.5kb upstream 6400 true Chr10: 42960316-42966715 Phaseolus vulgaris
Phvul.010G148700 0.5kb upstream 0.5kb upstream 500 false Chr10: 42960316-42960815 Phaseolus vulgaris
Phvul.010G148700 0.5kb downstream 0.5kb downstream 6400 true Chr10: 42960816-42967215 Phaseolus vulgaris
Phvul.010G148700 0.5kb downstream 0.5kb downstream 500 false Chr10: 42966716-42967215 Phaseolus vulgaris
Phvul.010G148700 1.0kb upstream 1.0kb upstream 6900 true Chr10: 42959816-42966715 Phaseolus vulgaris
Phvul.010G148700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42959816-42960815 Phaseolus vulgaris
Phvul.010G148700 1.0kb downstream 1.0kb downstream 6900 true Chr10: 42960816-42967715 Phaseolus vulgaris
Phvul.010G148700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42966716-42967715 Phaseolus vulgaris
Phvul.010G148700 2.0kb upstream 2.0kb upstream 7900 true Chr10: 42958816-42966715 Phaseolus vulgaris
Phvul.010G148700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42958816-42960815 Phaseolus vulgaris
Phvul.010G148700 2.0kb downstream 2.0kb downstream 7900 true Chr10: 42960816-42968715 Phaseolus vulgaris
Phvul.010G148700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42966716-42968715 Phaseolus vulgaris
Phvul.010G148700 5.0kb upstream 5.0kb upstream 10900 true Chr10: 42955816-42966715 Phaseolus vulgaris
Phvul.010G148700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42955816-42960815 Phaseolus vulgaris
Phvul.010G148700 5.0kb downstream 5.0kb downstream 10900 true Chr10: 42960816-42971715 Phaseolus vulgaris
Phvul.010G148700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42966716-42971715 Phaseolus vulgaris
Phvul.010G148700 10.0kb upstream 10.0kb upstream 15900 true Chr10: 42950816-42966715 Phaseolus vulgaris
Phvul.010G148700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42950816-42960815 Phaseolus vulgaris
Phvul.010G148700 10.0kb downstream 10.0kb downstream 15900 true Chr10: 42960816-42976715 Phaseolus vulgaris
Phvul.010G148700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42966716-42976715 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255281 5265 Fabidae View MSA
123997072 5270 Rosid View MSA
123571426 5271 Pentapetalae View MSA
122606152 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.922876 0.0 2.99049    
cufflinks 2.74089 0.0 7.84771    
cufflinks 5.10496 0.0 13.8332    
cufflinks 1.94302 0.0 5.82706    
cufflinks 2.68362 0.0 7.76442    
cufflinks 10.509 0.0 27.263   High
cufflinks 0.782298 0.0 2.56873    
cufflinks 0.671266 0.0 2.24377    
cufflinks 0.116465 0.0 0.457151 Low Low
cufflinks 1.29673 0.0 4.05239    
cufflinks 4.54308 0.0 12.4516    

0 Strain