Gene : Phvul.006G093900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11969:SF26 - TRANSCRIPTION FACTOR BHLH99 Genomic Order:  933
Name:  ? Phvul.006G093900 Secondary Identifier:  ? PAC:37172382
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G093900 0.5kb upstream 0.5kb upstream 2490 true Chr06: 20494172-20496661 Phaseolus vulgaris
Phvul.006G093900 0.5kb upstream 0.5kb upstream 500 false Chr06: 20494172-20494671 Phaseolus vulgaris
Phvul.006G093900 0.5kb downstream 0.5kb downstream 2490 true Chr06: 20494672-20497161 Phaseolus vulgaris
Phvul.006G093900 0.5kb downstream 0.5kb downstream 500 false Chr06: 20496662-20497161 Phaseolus vulgaris
Phvul.006G093900 1.0kb upstream 1.0kb upstream 2990 true Chr06: 20493672-20496661 Phaseolus vulgaris
Phvul.006G093900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20493672-20494671 Phaseolus vulgaris
Phvul.006G093900 1.0kb downstream 1.0kb downstream 2990 true Chr06: 20494672-20497661 Phaseolus vulgaris
Phvul.006G093900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20496662-20497661 Phaseolus vulgaris
Phvul.006G093900 2.0kb upstream 2.0kb upstream 3990 true Chr06: 20492672-20496661 Phaseolus vulgaris
Phvul.006G093900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20492672-20494671 Phaseolus vulgaris
Phvul.006G093900 2.0kb downstream 2.0kb downstream 3990 true Chr06: 20494672-20498661 Phaseolus vulgaris
Phvul.006G093900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20496662-20498661 Phaseolus vulgaris
Phvul.006G093900 5.0kb upstream 5.0kb upstream 6990 true Chr06: 20489672-20496661 Phaseolus vulgaris
Phvul.006G093900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20489672-20494671 Phaseolus vulgaris
Phvul.006G093900 5.0kb downstream 5.0kb downstream 6990 true Chr06: 20494672-20501661 Phaseolus vulgaris
Phvul.006G093900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20496662-20501661 Phaseolus vulgaris
Phvul.006G093900 10.0kb upstream 10.0kb upstream 11990 true Chr06: 20484672-20496661 Phaseolus vulgaris
Phvul.006G093900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20484672-20494671 Phaseolus vulgaris
Phvul.006G093900 10.0kb downstream 10.0kb downstream 11990 true Chr06: 20494672-20506661 Phaseolus vulgaris
Phvul.006G093900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20496662-20506661 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311835 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.0393 0.0 19.9102    
cufflinks 5.17556 0.0 15.0749    
cufflinks 0.341419 0.0 1.31296 Low Low
cufflinks 2.94645 0.0 9.1928    
cufflinks 11.5348 0.0 31.3537    
cufflinks 3.54638 0.0 10.7697    
cufflinks 7.25919 0.0 20.3852    
cufflinks 6.08094 0.0 17.337    
cufflinks 2.53219 0.0 7.98161    
cufflinks 1.01298 0.0 3.56041   Low
cufflinks 19.065 0.0 49.9464   High

0 Strain