Gene : Phvul.010G151100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  1522
Name:  ? Phvul.010G151100 Secondary Identifier:  ? PAC:37143009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G151100 0.5kb upstream 0.5kb upstream 2645 true Chr10: 43104898-43107542 Phaseolus vulgaris
Phvul.010G151100 0.5kb upstream 0.5kb upstream 500 false Chr10: 43104898-43105397 Phaseolus vulgaris
Phvul.010G151100 0.5kb downstream 0.5kb downstream 2645 true Chr10: 43105398-43108042 Phaseolus vulgaris
Phvul.010G151100 0.5kb downstream 0.5kb downstream 500 false Chr10: 43107543-43108042 Phaseolus vulgaris
Phvul.010G151100 1.0kb upstream 1.0kb upstream 3145 true Chr10: 43104398-43107542 Phaseolus vulgaris
Phvul.010G151100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43104398-43105397 Phaseolus vulgaris
Phvul.010G151100 1.0kb downstream 1.0kb downstream 3145 true Chr10: 43105398-43108542 Phaseolus vulgaris
Phvul.010G151100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43107543-43108542 Phaseolus vulgaris
Phvul.010G151100 2.0kb upstream 2.0kb upstream 4145 true Chr10: 43103398-43107542 Phaseolus vulgaris
Phvul.010G151100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43103398-43105397 Phaseolus vulgaris
Phvul.010G151100 2.0kb downstream 2.0kb downstream 4145 true Chr10: 43105398-43109542 Phaseolus vulgaris
Phvul.010G151100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43107543-43109542 Phaseolus vulgaris
Phvul.010G151100 5.0kb upstream 5.0kb upstream 7145 true Chr10: 43100398-43107542 Phaseolus vulgaris
Phvul.010G151100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43100398-43105397 Phaseolus vulgaris
Phvul.010G151100 5.0kb downstream 5.0kb downstream 7145 true Chr10: 43105398-43112542 Phaseolus vulgaris
Phvul.010G151100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43107543-43112542 Phaseolus vulgaris
Phvul.010G151100 10.0kb upstream 10.0kb upstream 12145 true Chr10: 43095398-43107542 Phaseolus vulgaris
Phvul.010G151100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43095398-43105397 Phaseolus vulgaris
Phvul.010G151100 10.0kb downstream 10.0kb downstream 12145 true Chr10: 43105398-43117542 Phaseolus vulgaris
Phvul.010G151100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43107543-43117542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301693 5265 Fabidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.6517 0.0 157.57 High  
cufflinks 42.1878 0.0 117.632 High  
cufflinks 51.7545 0.0 168.666 High High
cufflinks 51.9267 0.0 144.685 High High
cufflinks 24.7321 0.0 71.7853    
cufflinks 61.5796 0.0 201.788 High High
cufflinks 11.5366 0.0 46.7881   Low
cufflinks 15.3364 0.0 47.8137   Low
cufflinks 15.0987 0.0 47.4447   Low
cufflinks 18.6862 0.0 56.6112    
cufflinks 22.0721 0.0 65.7058    

0 Strain