Gene : Phvul.010G153200 P. vulgaris v2.1
Defline:  (1 of 1) K02295 - cryptochrome (CRY) Genomic Order:  1544
Name:  ? Phvul.010G153200 Secondary Identifier:  ? PAC:37143814
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G153200 0.5kb upstream 0.5kb upstream 4937 true Chr10: 43306249-43311185 Phaseolus vulgaris
Phvul.010G153200 0.5kb upstream 0.5kb upstream 500 false Chr10: 43306249-43306748 Phaseolus vulgaris
Phvul.010G153200 0.5kb downstream 0.5kb downstream 4937 true Chr10: 43306749-43311685 Phaseolus vulgaris
Phvul.010G153200 0.5kb downstream 0.5kb downstream 500 false Chr10: 43311186-43311685 Phaseolus vulgaris
Phvul.010G153200 1.0kb upstream 1.0kb upstream 5437 true Chr10: 43305749-43311185 Phaseolus vulgaris
Phvul.010G153200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43305749-43306748 Phaseolus vulgaris
Phvul.010G153200 1.0kb downstream 1.0kb downstream 5437 true Chr10: 43306749-43312185 Phaseolus vulgaris
Phvul.010G153200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43311186-43312185 Phaseolus vulgaris
Phvul.010G153200 2.0kb upstream 2.0kb upstream 6437 true Chr10: 43304749-43311185 Phaseolus vulgaris
Phvul.010G153200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43304749-43306748 Phaseolus vulgaris
Phvul.010G153200 2.0kb downstream 2.0kb downstream 6437 true Chr10: 43306749-43313185 Phaseolus vulgaris
Phvul.010G153200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43311186-43313185 Phaseolus vulgaris
Phvul.010G153200 5.0kb upstream 5.0kb upstream 9437 true Chr10: 43301749-43311185 Phaseolus vulgaris
Phvul.010G153200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43301749-43306748 Phaseolus vulgaris
Phvul.010G153200 5.0kb downstream 5.0kb downstream 9437 true Chr10: 43306749-43316185 Phaseolus vulgaris
Phvul.010G153200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43311186-43316185 Phaseolus vulgaris
Phvul.010G153200 10.0kb upstream 10.0kb upstream 14437 true Chr10: 43296749-43311185 Phaseolus vulgaris
Phvul.010G153200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43296749-43306748 Phaseolus vulgaris
Phvul.010G153200 10.0kb downstream 10.0kb downstream 14437 true Chr10: 43306749-43321185 Phaseolus vulgaris
Phvul.010G153200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43311186-43321185 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301959 5265 Fabidae View MSA
124062043 5270 Rosid View MSA
123737581 5271 Pentapetalae View MSA
122791265 5272 Eudicot View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49932 0.0 4.89682    
cufflinks 1.9413 0.0 6.1859    
cufflinks 2.75652 0.0 8.42421    
cufflinks 1.5878 0.0 5.19763    
cufflinks 2.07507 0.0 6.59339    
cufflinks 5.63357 0.0 15.9232   High
cufflinks 0.28351 0.0 1.09044 Low Low
cufflinks 0.269065 0.0 1.03863 Low Low
cufflinks 0.201957 0.0 0.799231 Low Low
cufflinks 0.963185 0.0 3.33397    
cufflinks 4.64638 0.0 13.451   High

0 Strain