Gene : Phvul.006G096600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR20863:SF29 - ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  961
Name:  ? Phvul.006G096600 Secondary Identifier:  ? PAC:37174213
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G096600 0.5kb upstream 0.5kb upstream 2876 true Chr06: 20735333-20738208 Phaseolus vulgaris
Phvul.006G096600 0.5kb upstream 0.5kb upstream 500 false Chr06: 20735333-20735832 Phaseolus vulgaris
Phvul.006G096600 0.5kb downstream 0.5kb downstream 2876 true Chr06: 20735833-20738708 Phaseolus vulgaris
Phvul.006G096600 0.5kb downstream 0.5kb downstream 500 false Chr06: 20738209-20738708 Phaseolus vulgaris
Phvul.006G096600 1.0kb upstream 1.0kb upstream 3376 true Chr06: 20734833-20738208 Phaseolus vulgaris
Phvul.006G096600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20734833-20735832 Phaseolus vulgaris
Phvul.006G096600 1.0kb downstream 1.0kb downstream 3376 true Chr06: 20735833-20739208 Phaseolus vulgaris
Phvul.006G096600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20738209-20739208 Phaseolus vulgaris
Phvul.006G096600 2.0kb upstream 2.0kb upstream 4376 true Chr06: 20733833-20738208 Phaseolus vulgaris
Phvul.006G096600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20733833-20735832 Phaseolus vulgaris
Phvul.006G096600 2.0kb downstream 2.0kb downstream 4376 true Chr06: 20735833-20740208 Phaseolus vulgaris
Phvul.006G096600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20738209-20740208 Phaseolus vulgaris
Phvul.006G096600 5.0kb upstream 5.0kb upstream 7376 true Chr06: 20730833-20738208 Phaseolus vulgaris
Phvul.006G096600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20730833-20735832 Phaseolus vulgaris
Phvul.006G096600 5.0kb downstream 5.0kb downstream 7376 true Chr06: 20735833-20743208 Phaseolus vulgaris
Phvul.006G096600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20738209-20743208 Phaseolus vulgaris
Phvul.006G096600 10.0kb upstream 10.0kb upstream 12376 true Chr06: 20725833-20738208 Phaseolus vulgaris
Phvul.006G096600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20725833-20735832 Phaseolus vulgaris
Phvul.006G096600 10.0kb downstream 10.0kb downstream 12376 true Chr06: 20735833-20748208 Phaseolus vulgaris
Phvul.006G096600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20738209-20748208 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309206 5265 Fabidae View MSA
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 160.166 0.0 424.37 High  
cufflinks 197.188 0.0 531.243 High  
cufflinks 81.4619 0.0 210.592 High Low
cufflinks 325.857 0.0 927.118 High High
cufflinks 142.902 0.0 374.858 High  
cufflinks 110.645 0.0 287.528 High  
cufflinks 110.862 0.0 288.365 High  
cufflinks 142.786 0.0 375.672 High  
cufflinks 140.851 0.0 370.432 High  
cufflinks 142.499 0.0 374.459 High  
cufflinks 162.461 0.0 430.595 High  

0 Strain