Gene : Phvul.010G152500 P. vulgaris v2.1
Defline:  (1 of 18) PTHR19241:SF219 - ABC TRANSPORTER G FAMILY MEMBER 38 Genomic Order:  1537
Name:  ? Phvul.010G152500 Secondary Identifier:  ? PAC:37143695
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G152500 0.5kb upstream 0.5kb upstream 9038 true Chr10: 43253329-43262366 Phaseolus vulgaris
Phvul.010G152500 0.5kb upstream 0.5kb upstream 500 false Chr10: 43261867-43262366 Phaseolus vulgaris
Phvul.010G152500 0.5kb downstream 0.5kb downstream 9038 true Chr10: 43252829-43261866 Phaseolus vulgaris
Phvul.010G152500 0.5kb downstream 0.5kb downstream 500 false Chr10: 43252829-43253328 Phaseolus vulgaris
Phvul.010G152500 1.0kb upstream 1.0kb upstream 9538 true Chr10: 43253329-43262866 Phaseolus vulgaris
Phvul.010G152500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43261867-43262866 Phaseolus vulgaris
Phvul.010G152500 1.0kb downstream 1.0kb downstream 9538 true Chr10: 43252329-43261866 Phaseolus vulgaris
Phvul.010G152500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43252329-43253328 Phaseolus vulgaris
Phvul.010G152500 2.0kb upstream 2.0kb upstream 10538 true Chr10: 43253329-43263866 Phaseolus vulgaris
Phvul.010G152500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43261867-43263866 Phaseolus vulgaris
Phvul.010G152500 2.0kb downstream 2.0kb downstream 10538 true Chr10: 43251329-43261866 Phaseolus vulgaris
Phvul.010G152500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43251329-43253328 Phaseolus vulgaris
Phvul.010G152500 5.0kb upstream 5.0kb upstream 13538 true Chr10: 43253329-43266866 Phaseolus vulgaris
Phvul.010G152500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43261867-43266866 Phaseolus vulgaris
Phvul.010G152500 5.0kb downstream 5.0kb downstream 13538 true Chr10: 43248329-43261866 Phaseolus vulgaris
Phvul.010G152500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43248329-43253328 Phaseolus vulgaris
Phvul.010G152500 10.0kb upstream 10.0kb upstream 18538 true Chr10: 43253329-43271866 Phaseolus vulgaris
Phvul.010G152500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43261867-43271866 Phaseolus vulgaris
Phvul.010G152500 10.0kb downstream 10.0kb downstream 18538 true Chr10: 43243329-43261866 Phaseolus vulgaris
Phvul.010G152500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43243329-43253328 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041102 5273 Angiosperm View MSA
122314149 5265 Fabidae View MSA
124071105 5270 Rosid View MSA
123750377 5271 Pentapetalae View MSA
122791743 5272 Eudicot View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68394 0.0 5.85996    
cufflinks 0.191403 0.0 0.860913 Low  
cufflinks 0.290474 0.0 1.23576 Low  
cufflinks 14.4995 0.0 52.9131   High
cufflinks 0.247507 0.0 1.10768 Low  
cufflinks 2.88364 0.0 11.6925   High
cufflinks 0.134275 0.0 0.62821 Low  
cufflinks 0.169578 0.0 1.06426 Low  
cufflinks 0.1339 0.0 0.630341 Low  
cufflinks 0.438821 0.0 1.68701    
cufflinks 0.993093 0.0 4.10092    

0 Strain