Gene : Phvul.010G140900 P. vulgaris v2.1
Defline:  (1 of 7) 3.1.3.75 - Phosphoethanolamine/phosphocholine phosphatase / PHOSPHO1 Genomic Order:  1418
Name:  ? Phvul.010G140900 Secondary Identifier:  ? PAC:37142143
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3385 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G140900 0.5kb upstream 0.5kb upstream 2240 true Chr10: 42290472-42292711 Phaseolus vulgaris
Phvul.010G140900 0.5kb upstream 0.5kb upstream 500 false Chr10: 42292212-42292711 Phaseolus vulgaris
Phvul.010G140900 0.5kb downstream 0.5kb downstream 2240 true Chr10: 42289972-42292211 Phaseolus vulgaris
Phvul.010G140900 0.5kb downstream 0.5kb downstream 500 false Chr10: 42289972-42290471 Phaseolus vulgaris
Phvul.010G140900 1.0kb upstream 1.0kb upstream 2740 true Chr10: 42290472-42293211 Phaseolus vulgaris
Phvul.010G140900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42292212-42293211 Phaseolus vulgaris
Phvul.010G140900 1.0kb downstream 1.0kb downstream 2740 true Chr10: 42289472-42292211 Phaseolus vulgaris
Phvul.010G140900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42289472-42290471 Phaseolus vulgaris
Phvul.010G140900 2.0kb upstream 2.0kb upstream 3740 true Chr10: 42290472-42294211 Phaseolus vulgaris
Phvul.010G140900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42292212-42294211 Phaseolus vulgaris
Phvul.010G140900 2.0kb downstream 2.0kb downstream 3740 true Chr10: 42288472-42292211 Phaseolus vulgaris
Phvul.010G140900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42288472-42290471 Phaseolus vulgaris
Phvul.010G140900 5.0kb upstream 5.0kb upstream 6740 true Chr10: 42290472-42297211 Phaseolus vulgaris
Phvul.010G140900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42292212-42297211 Phaseolus vulgaris
Phvul.010G140900 5.0kb downstream 5.0kb downstream 6740 true Chr10: 42285472-42292211 Phaseolus vulgaris
Phvul.010G140900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42285472-42290471 Phaseolus vulgaris
Phvul.010G140900 10.0kb upstream 10.0kb upstream 11740 true Chr10: 42290472-42302211 Phaseolus vulgaris
Phvul.010G140900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42292212-42302211 Phaseolus vulgaris
Phvul.010G140900 10.0kb downstream 10.0kb downstream 11740 true Chr10: 42280472-42292211 Phaseolus vulgaris
Phvul.010G140900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42280472-42290471 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122299252 5265 Fabidae View MSA
124071983 5270 Rosid View MSA
123744582 5271 Pentapetalae View MSA
122796230 5272 Eudicot View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.695 0.0 37.4202   High
cufflinks 0.597622 0.0 2.26429    
cufflinks 0.319578 0.0 1.26582 Low  
cufflinks 1.98275 0.0 6.76238    
cufflinks 0.00947456 0.0 0.0546731 Low Low
cufflinks 0.64595 0.0 2.42844    
cufflinks 0.83722 0.0 3.08397    
cufflinks 0.377218 0.0 1.47898 Low  
cufflinks 0.727703 0.0 2.71992    
cufflinks 0.294145 0.0 1.18037 Low  
cufflinks 0.27172 0.0 1.09924 Low  

0 Strain