Gene : Phvul.006G083500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22911//PTHR22911:SF60 - ACYL-MALONYL CONDENSING ENZYME-RELATED // SUBFAMILY NOT NAMED Genomic Order:  820
Name:  ? Phvul.006G083500 Secondary Identifier:  ? PAC:37172276
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G083500 0.5kb upstream 0.5kb upstream 4485 true Chr06: 19552165-19556649 Phaseolus vulgaris
Phvul.006G083500 0.5kb upstream 0.5kb upstream 500 false Chr06: 19556150-19556649 Phaseolus vulgaris
Phvul.006G083500 0.5kb downstream 0.5kb downstream 4485 true Chr06: 19551665-19556149 Phaseolus vulgaris
Phvul.006G083500 0.5kb downstream 0.5kb downstream 500 false Chr06: 19551665-19552164 Phaseolus vulgaris
Phvul.006G083500 1.0kb upstream 1.0kb upstream 4985 true Chr06: 19552165-19557149 Phaseolus vulgaris
Phvul.006G083500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19556150-19557149 Phaseolus vulgaris
Phvul.006G083500 1.0kb downstream 1.0kb downstream 4985 true Chr06: 19551165-19556149 Phaseolus vulgaris
Phvul.006G083500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19551165-19552164 Phaseolus vulgaris
Phvul.006G083500 2.0kb upstream 2.0kb upstream 5985 true Chr06: 19552165-19558149 Phaseolus vulgaris
Phvul.006G083500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19556150-19558149 Phaseolus vulgaris
Phvul.006G083500 2.0kb downstream 2.0kb downstream 5985 true Chr06: 19550165-19556149 Phaseolus vulgaris
Phvul.006G083500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19550165-19552164 Phaseolus vulgaris
Phvul.006G083500 5.0kb upstream 5.0kb upstream 8985 true Chr06: 19552165-19561149 Phaseolus vulgaris
Phvul.006G083500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19556150-19561149 Phaseolus vulgaris
Phvul.006G083500 5.0kb downstream 5.0kb downstream 8985 true Chr06: 19547165-19556149 Phaseolus vulgaris
Phvul.006G083500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19547165-19552164 Phaseolus vulgaris
Phvul.006G083500 10.0kb upstream 10.0kb upstream 13985 true Chr06: 19552165-19566149 Phaseolus vulgaris
Phvul.006G083500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19556150-19566149 Phaseolus vulgaris
Phvul.006G083500 10.0kb downstream 10.0kb downstream 13985 true Chr06: 19542165-19556149 Phaseolus vulgaris
Phvul.006G083500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19542165-19552164 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040883 5273 Angiosperm View MSA
122308531 5265 Fabidae View MSA
124066497 5270 Rosid View MSA
123739525 5271 Pentapetalae View MSA
122790442 5272 Eudicot View MSA
121351564 5274 Embryophyte View MSA
123424417 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0253 0.0 49.5142    
cufflinks 15.376 0.0 40.5163    
cufflinks 42.7713 0.0 111.251 High High
cufflinks 14.4137 0.0 38.1084    
cufflinks 17.0325 0.0 44.5188    
cufflinks 17.6029 0.0 46.0767    
cufflinks 3.37818 0.0 10.2603   Low
cufflinks 3.82517 0.0 11.4692   Low
cufflinks 3.28967 0.0 10.0697   Low
cufflinks 34.5572 0.0 89.4717   High
cufflinks 15.3737 0.0 40.4377    

0 Strain