Gene : Phvul.010G142000 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.1.4 - Glutamate dehydrogenase (NADP(+)) / Glutamic dehydrogenase Genomic Order:  1431
Name:  ? Phvul.010G142000 Secondary Identifier:  ? PAC:37143761
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G142000 0.5kb upstream 0.5kb upstream 14070 true Chr10: 42425592-42439661 Phaseolus vulgaris
Phvul.010G142000 0.5kb upstream 0.5kb upstream 500 false Chr10: 42425592-42426091 Phaseolus vulgaris
Phvul.010G142000 0.5kb downstream 0.5kb downstream 14070 true Chr10: 42426092-42440161 Phaseolus vulgaris
Phvul.010G142000 0.5kb downstream 0.5kb downstream 500 false Chr10: 42439662-42440161 Phaseolus vulgaris
Phvul.010G142000 1.0kb upstream 1.0kb upstream 14570 true Chr10: 42425092-42439661 Phaseolus vulgaris
Phvul.010G142000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42425092-42426091 Phaseolus vulgaris
Phvul.010G142000 1.0kb downstream 1.0kb downstream 14570 true Chr10: 42426092-42440661 Phaseolus vulgaris
Phvul.010G142000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42439662-42440661 Phaseolus vulgaris
Phvul.010G142000 2.0kb upstream 2.0kb upstream 15570 true Chr10: 42424092-42439661 Phaseolus vulgaris
Phvul.010G142000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42424092-42426091 Phaseolus vulgaris
Phvul.010G142000 2.0kb downstream 2.0kb downstream 15570 true Chr10: 42426092-42441661 Phaseolus vulgaris
Phvul.010G142000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42439662-42441661 Phaseolus vulgaris
Phvul.010G142000 5.0kb upstream 5.0kb upstream 18570 true Chr10: 42421092-42439661 Phaseolus vulgaris
Phvul.010G142000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42421092-42426091 Phaseolus vulgaris
Phvul.010G142000 5.0kb downstream 5.0kb downstream 18570 true Chr10: 42426092-42444661 Phaseolus vulgaris
Phvul.010G142000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42439662-42444661 Phaseolus vulgaris
Phvul.010G142000 10.0kb upstream 10.0kb upstream 23570 true Chr10: 42416092-42439661 Phaseolus vulgaris
Phvul.010G142000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42416092-42426091 Phaseolus vulgaris
Phvul.010G142000 10.0kb downstream 10.0kb downstream 23570 true Chr10: 42426092-42449661 Phaseolus vulgaris
Phvul.010G142000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42439662-42449661 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308669 5265 Fabidae View MSA
124065278 5270 Rosid View MSA
123736888 5271 Pentapetalae View MSA
122786515 5272 Eudicot View MSA
122043917 5273 Angiosperm View MSA
121345639 5274 Embryophyte View MSA
123424144 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.19651 0.0 25.1963    
cufflinks 8.55429 0.0 24.976    
cufflinks 6.82388 0.0 20.5743   Low
cufflinks 6.34983 0.0 23.2927   Low
cufflinks 8.58165 0.0 29.3959    
cufflinks 7.28994 0.0 21.8123    
cufflinks 12.3257 0.0 34.7227   High
cufflinks 10.8016 0.0 30.6301    
cufflinks 10.2458 0.0 29.503    
cufflinks 15.1273 0.0 49.2155   High
cufflinks 8.42713 0.0 29.0309    

0 Strain