Gene : Phvul.006G085000 P. vulgaris v2.1
Defline:  (1 of 1) K18881 - D-lactate dehydratase (DJ1D) Genomic Order:  835
Name:  ? Phvul.006G085000 Secondary Identifier:  ? PAC:37171564
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G085000 0.5kb upstream 0.5kb upstream 4803 true Chr06: 19648148-19652950 Phaseolus vulgaris
Phvul.006G085000 0.5kb upstream 0.5kb upstream 500 false Chr06: 19652451-19652950 Phaseolus vulgaris
Phvul.006G085000 0.5kb downstream 0.5kb downstream 4803 true Chr06: 19647648-19652450 Phaseolus vulgaris
Phvul.006G085000 0.5kb downstream 0.5kb downstream 500 false Chr06: 19647648-19648147 Phaseolus vulgaris
Phvul.006G085000 1.0kb upstream 1.0kb upstream 5303 true Chr06: 19648148-19653450 Phaseolus vulgaris
Phvul.006G085000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19652451-19653450 Phaseolus vulgaris
Phvul.006G085000 1.0kb downstream 1.0kb downstream 5303 true Chr06: 19647148-19652450 Phaseolus vulgaris
Phvul.006G085000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19647148-19648147 Phaseolus vulgaris
Phvul.006G085000 2.0kb upstream 2.0kb upstream 6303 true Chr06: 19648148-19654450 Phaseolus vulgaris
Phvul.006G085000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19652451-19654450 Phaseolus vulgaris
Phvul.006G085000 2.0kb downstream 2.0kb downstream 6303 true Chr06: 19646148-19652450 Phaseolus vulgaris
Phvul.006G085000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19646148-19648147 Phaseolus vulgaris
Phvul.006G085000 5.0kb upstream 5.0kb upstream 9303 true Chr06: 19648148-19657450 Phaseolus vulgaris
Phvul.006G085000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19652451-19657450 Phaseolus vulgaris
Phvul.006G085000 5.0kb downstream 5.0kb downstream 9303 true Chr06: 19643148-19652450 Phaseolus vulgaris
Phvul.006G085000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19643148-19648147 Phaseolus vulgaris
Phvul.006G085000 10.0kb upstream 10.0kb upstream 14303 true Chr06: 19648148-19662450 Phaseolus vulgaris
Phvul.006G085000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19652451-19662450 Phaseolus vulgaris
Phvul.006G085000 10.0kb downstream 10.0kb downstream 14303 true Chr06: 19638148-19652450 Phaseolus vulgaris
Phvul.006G085000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19638148-19648147 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041191 5273 Angiosperm View MSA
122309086 5265 Fabidae View MSA
124065269 5270 Rosid View MSA
123738443 5271 Pentapetalae View MSA
122790348 5272 Eudicot View MSA
121345877 5274 Embryophyte View MSA
123380281 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.3937 0.0 102.337 High  
cufflinks 45.8817 0.0 119.858 High  
cufflinks 59.3613 0.0 157.656 High High
cufflinks 45.2224 0.0 117.805 High  
cufflinks 50.288 0.0 131.867 High  
cufflinks 41.9038 0.0 109.11 High  
cufflinks 17.4474 0.0 45.5767   Low
cufflinks 24.8286 0.0 64.2181    
cufflinks 17.4491 0.0 45.6307   Low
cufflinks 63.8549 0.0 170.201 High High
cufflinks 38.4713 0.0 99.7903 High  

0 Strain