Gene : Phvul.006G085300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10887:SF358 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  838
Name:  ? Phvul.006G085300 Secondary Identifier:  ? PAC:37173992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G085300 0.5kb upstream 0.5kb upstream 7625 true Chr06: 19664847-19672471 Phaseolus vulgaris
Phvul.006G085300 0.5kb upstream 0.5kb upstream 500 false Chr06: 19671972-19672471 Phaseolus vulgaris
Phvul.006G085300 0.5kb downstream 0.5kb downstream 7625 true Chr06: 19664347-19671971 Phaseolus vulgaris
Phvul.006G085300 0.5kb downstream 0.5kb downstream 500 false Chr06: 19664347-19664846 Phaseolus vulgaris
Phvul.006G085300 1.0kb upstream 1.0kb upstream 8125 true Chr06: 19664847-19672971 Phaseolus vulgaris
Phvul.006G085300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19671972-19672971 Phaseolus vulgaris
Phvul.006G085300 1.0kb downstream 1.0kb downstream 8125 true Chr06: 19663847-19671971 Phaseolus vulgaris
Phvul.006G085300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19663847-19664846 Phaseolus vulgaris
Phvul.006G085300 2.0kb upstream 2.0kb upstream 9125 true Chr06: 19664847-19673971 Phaseolus vulgaris
Phvul.006G085300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19671972-19673971 Phaseolus vulgaris
Phvul.006G085300 2.0kb downstream 2.0kb downstream 9125 true Chr06: 19662847-19671971 Phaseolus vulgaris
Phvul.006G085300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19662847-19664846 Phaseolus vulgaris
Phvul.006G085300 5.0kb upstream 5.0kb upstream 12125 true Chr06: 19664847-19676971 Phaseolus vulgaris
Phvul.006G085300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19671972-19676971 Phaseolus vulgaris
Phvul.006G085300 5.0kb downstream 5.0kb downstream 12125 true Chr06: 19659847-19671971 Phaseolus vulgaris
Phvul.006G085300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19659847-19664846 Phaseolus vulgaris
Phvul.006G085300 10.0kb upstream 10.0kb upstream 17125 true Chr06: 19664847-19681971 Phaseolus vulgaris
Phvul.006G085300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19671972-19681971 Phaseolus vulgaris
Phvul.006G085300 10.0kb downstream 10.0kb downstream 17125 true Chr06: 19654847-19671971 Phaseolus vulgaris
Phvul.006G085300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19654847-19664846 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314494 5265 Fabidae View MSA
124072227 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248832 0.0 0.914797 Low Low
cufflinks 0.381997 0.0 1.35393 Low  
cufflinks 1.60554 0.0 4.81647   High
cufflinks 0.517687 0.0 1.80272 Low  
cufflinks 0.457182 0.0 1.60949 Low  
cufflinks 1.01416 0.0 3.21988    
cufflinks 0.629317 0.0 2.12249    
cufflinks 1.49323 0.0 4.5125   High
cufflinks 0.479817 0.0 1.67364 Low  
cufflinks 0.861786 0.0 2.79358    
cufflinks 0.464663 0.0 1.6292 Low  

0 Strain