Gene : Phvul.010G141700 P. vulgaris v2.1
Defline:  (1 of 1) K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Genomic Order:  1428
Name:  ? Phvul.010G141700 Secondary Identifier:  ? PAC:37144055
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G141700 0.5kb upstream 0.5kb upstream 9852 true Chr10: 42379478-42389329 Phaseolus vulgaris
Phvul.010G141700 0.5kb upstream 0.5kb upstream 500 false Chr10: 42388830-42389329 Phaseolus vulgaris
Phvul.010G141700 0.5kb downstream 0.5kb downstream 9852 true Chr10: 42378978-42388829 Phaseolus vulgaris
Phvul.010G141700 0.5kb downstream 0.5kb downstream 500 false Chr10: 42378978-42379477 Phaseolus vulgaris
Phvul.010G141700 1.0kb upstream 1.0kb upstream 10352 true Chr10: 42379478-42389829 Phaseolus vulgaris
Phvul.010G141700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42388830-42389829 Phaseolus vulgaris
Phvul.010G141700 1.0kb downstream 1.0kb downstream 10352 true Chr10: 42378478-42388829 Phaseolus vulgaris
Phvul.010G141700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42378478-42379477 Phaseolus vulgaris
Phvul.010G141700 2.0kb upstream 2.0kb upstream 11352 true Chr10: 42379478-42390829 Phaseolus vulgaris
Phvul.010G141700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42388830-42390829 Phaseolus vulgaris
Phvul.010G141700 2.0kb downstream 2.0kb downstream 11352 true Chr10: 42377478-42388829 Phaseolus vulgaris
Phvul.010G141700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42377478-42379477 Phaseolus vulgaris
Phvul.010G141700 5.0kb upstream 5.0kb upstream 14352 true Chr10: 42379478-42393829 Phaseolus vulgaris
Phvul.010G141700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42388830-42393829 Phaseolus vulgaris
Phvul.010G141700 5.0kb downstream 5.0kb downstream 14352 true Chr10: 42374478-42388829 Phaseolus vulgaris
Phvul.010G141700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42374478-42379477 Phaseolus vulgaris
Phvul.010G141700 10.0kb upstream 10.0kb upstream 19352 true Chr10: 42379478-42398829 Phaseolus vulgaris
Phvul.010G141700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42388830-42398829 Phaseolus vulgaris
Phvul.010G141700 10.0kb downstream 10.0kb downstream 19352 true Chr10: 42369478-42388829 Phaseolus vulgaris
Phvul.010G141700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42369478-42379477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299922 5265 Fabidae View MSA
124066467 5270 Rosid View MSA
123739899 5271 Pentapetalae View MSA
122787327 5272 Eudicot View MSA
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.8119 0.0 127.112 High  
cufflinks 41.2408 0.0 108.4 High  
cufflinks 34.9525 0.0 91.2858    
cufflinks 61.389 0.0 164.704 High High
cufflinks 34.4878 0.0 89.6405 High  
cufflinks 31.3228 0.0 81.3938   Low
cufflinks 39.7476 0.0 104.314 High  
cufflinks 41.0815 0.0 108.329 High  
cufflinks 50.0003 0.0 132.94 High High
cufflinks 30.9305 0.0 80.2786   Low
cufflinks 42.3879 0.0 111.266 High  

0 Strain