Gene : Phvul.010G141800 P. vulgaris v2.1
Defline:  (1 of 1) KOG4796 - RNA polymerase II elongation factor Genomic Order:  1429
Name:  ? Phvul.010G141800 Secondary Identifier:  ? PAC:37142491
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G141800 0.5kb upstream 0.5kb upstream 9265 true Chr10: 42401378-42410642 Phaseolus vulgaris
Phvul.010G141800 0.5kb upstream 0.5kb upstream 500 false Chr10: 42401378-42401877 Phaseolus vulgaris
Phvul.010G141800 0.5kb downstream 0.5kb downstream 9265 true Chr10: 42401878-42411142 Phaseolus vulgaris
Phvul.010G141800 0.5kb downstream 0.5kb downstream 500 false Chr10: 42410643-42411142 Phaseolus vulgaris
Phvul.010G141800 1.0kb upstream 1.0kb upstream 9765 true Chr10: 42400878-42410642 Phaseolus vulgaris
Phvul.010G141800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42400878-42401877 Phaseolus vulgaris
Phvul.010G141800 1.0kb downstream 1.0kb downstream 9765 true Chr10: 42401878-42411642 Phaseolus vulgaris
Phvul.010G141800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42410643-42411642 Phaseolus vulgaris
Phvul.010G141800 2.0kb upstream 2.0kb upstream 10765 true Chr10: 42399878-42410642 Phaseolus vulgaris
Phvul.010G141800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42399878-42401877 Phaseolus vulgaris
Phvul.010G141800 2.0kb downstream 2.0kb downstream 10765 true Chr10: 42401878-42412642 Phaseolus vulgaris
Phvul.010G141800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42410643-42412642 Phaseolus vulgaris
Phvul.010G141800 5.0kb upstream 5.0kb upstream 13765 true Chr10: 42396878-42410642 Phaseolus vulgaris
Phvul.010G141800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42396878-42401877 Phaseolus vulgaris
Phvul.010G141800 5.0kb downstream 5.0kb downstream 13765 true Chr10: 42401878-42415642 Phaseolus vulgaris
Phvul.010G141800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42410643-42415642 Phaseolus vulgaris
Phvul.010G141800 10.0kb upstream 10.0kb upstream 18765 true Chr10: 42391878-42410642 Phaseolus vulgaris
Phvul.010G141800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42391878-42401877 Phaseolus vulgaris
Phvul.010G141800 10.0kb downstream 10.0kb downstream 18765 true Chr10: 42401878-42420642 Phaseolus vulgaris
Phvul.010G141800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42410643-42420642 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303801 5265 Fabidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.14 0.0 3.43135   Low
cufflinks 2.82254 0.0 7.75098    
cufflinks 6.15214 0.0 16.0135   High
cufflinks 1.00728 0.0 3.10794   Low
cufflinks 2.68857 0.0 7.47032    
cufflinks 5.16304 0.0 13.5464    
cufflinks 4.74575 0.0 12.4841    
cufflinks 3.96012 0.0 10.5193    
cufflinks 3.63145 0.0 9.73775    
cufflinks 6.6054 0.0 17.1596   High
cufflinks 2.02589 0.0 5.74985    

0 Strain