Gene : Phvul.010G143300 P. vulgaris v2.1
Defline:  (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) Genomic Order:  1445
Name:  ? Phvul.010G143300 Secondary Identifier:  ? PAC:37142761
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G143300 0.5kb upstream 0.5kb upstream 3196 true Chr10: 42532016-42535211 Phaseolus vulgaris
Phvul.010G143300 0.5kb upstream 0.5kb upstream 500 false Chr10: 42532016-42532515 Phaseolus vulgaris
Phvul.010G143300 0.5kb downstream 0.5kb downstream 3196 true Chr10: 42532516-42535711 Phaseolus vulgaris
Phvul.010G143300 0.5kb downstream 0.5kb downstream 500 false Chr10: 42535212-42535711 Phaseolus vulgaris
Phvul.010G143300 1.0kb upstream 1.0kb upstream 3696 true Chr10: 42531516-42535211 Phaseolus vulgaris
Phvul.010G143300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42531516-42532515 Phaseolus vulgaris
Phvul.010G143300 1.0kb downstream 1.0kb downstream 3696 true Chr10: 42532516-42536211 Phaseolus vulgaris
Phvul.010G143300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42535212-42536211 Phaseolus vulgaris
Phvul.010G143300 2.0kb upstream 2.0kb upstream 4696 true Chr10: 42530516-42535211 Phaseolus vulgaris
Phvul.010G143300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42530516-42532515 Phaseolus vulgaris
Phvul.010G143300 2.0kb downstream 2.0kb downstream 4696 true Chr10: 42532516-42537211 Phaseolus vulgaris
Phvul.010G143300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42535212-42537211 Phaseolus vulgaris
Phvul.010G143300 5.0kb upstream 5.0kb upstream 7696 true Chr10: 42527516-42535211 Phaseolus vulgaris
Phvul.010G143300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42527516-42532515 Phaseolus vulgaris
Phvul.010G143300 5.0kb downstream 5.0kb downstream 7696 true Chr10: 42532516-42540211 Phaseolus vulgaris
Phvul.010G143300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42535212-42540211 Phaseolus vulgaris
Phvul.010G143300 10.0kb upstream 10.0kb upstream 12696 true Chr10: 42522516-42535211 Phaseolus vulgaris
Phvul.010G143300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42522516-42532515 Phaseolus vulgaris
Phvul.010G143300 10.0kb downstream 10.0kb downstream 12696 true Chr10: 42532516-42545211 Phaseolus vulgaris
Phvul.010G143300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42535212-42545211 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299825 5265 Fabidae View MSA
124065593 5270 Rosid View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.20661 0.0 89.1702   High
cufflinks 7.36637 0.0 75.4736    
cufflinks 4.85609 0.0 434.818   Low
cufflinks 9.0741 0.0 75.9833   High
cufflinks 5.6035 0.0 74.7243    
cufflinks 5.65793 0.0 141.831    
cufflinks 5.37993 0.0 50.8384    
cufflinks 5.8022 0.0 44.6899    
cufflinks 5.79505 0.0 55.0018    
cufflinks 6.84626 0.0 88.6618    
cufflinks 6.82967 0.0 74.0062    

0 Strain