Gene : Phvul.010G143500 P. vulgaris v2.1
Defline:  (1 of 8) 1.13.99.1 - Inositol oxygenase / Myo-inositol oxygenase Genomic Order:  1446
Name:  ? Phvul.010G143500 Secondary Identifier:  ? PAC:37142661
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G143500 0.5kb upstream 0.5kb upstream 4085 true Chr10: 42540802-42544886 Phaseolus vulgaris
Phvul.010G143500 0.5kb upstream 0.5kb upstream 500 false Chr10: 42540802-42541301 Phaseolus vulgaris
Phvul.010G143500 0.5kb downstream 0.5kb downstream 4085 true Chr10: 42541302-42545386 Phaseolus vulgaris
Phvul.010G143500 0.5kb downstream 0.5kb downstream 500 false Chr10: 42544887-42545386 Phaseolus vulgaris
Phvul.010G143500 1.0kb upstream 1.0kb upstream 4585 true Chr10: 42540302-42544886 Phaseolus vulgaris
Phvul.010G143500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42540302-42541301 Phaseolus vulgaris
Phvul.010G143500 1.0kb downstream 1.0kb downstream 4585 true Chr10: 42541302-42545886 Phaseolus vulgaris
Phvul.010G143500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42544887-42545886 Phaseolus vulgaris
Phvul.010G143500 2.0kb upstream 2.0kb upstream 5585 true Chr10: 42539302-42544886 Phaseolus vulgaris
Phvul.010G143500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42539302-42541301 Phaseolus vulgaris
Phvul.010G143500 2.0kb downstream 2.0kb downstream 5585 true Chr10: 42541302-42546886 Phaseolus vulgaris
Phvul.010G143500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42544887-42546886 Phaseolus vulgaris
Phvul.010G143500 5.0kb upstream 5.0kb upstream 8585 true Chr10: 42536302-42544886 Phaseolus vulgaris
Phvul.010G143500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42536302-42541301 Phaseolus vulgaris
Phvul.010G143500 5.0kb downstream 5.0kb downstream 8585 true Chr10: 42541302-42549886 Phaseolus vulgaris
Phvul.010G143500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42544887-42549886 Phaseolus vulgaris
Phvul.010G143500 10.0kb upstream 10.0kb upstream 13585 true Chr10: 42531302-42544886 Phaseolus vulgaris
Phvul.010G143500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42531302-42541301 Phaseolus vulgaris
Phvul.010G143500 10.0kb downstream 10.0kb downstream 13585 true Chr10: 42541302-42554886 Phaseolus vulgaris
Phvul.010G143500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42544887-42554886 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313720 5265 Fabidae View MSA
124063382 5270 Rosid View MSA
123743695 5271 Pentapetalae View MSA
122796011 5272 Eudicot View MSA
122042225 5273 Angiosperm View MSA
121347706 5274 Embryophyte View MSA
123428319 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30238 0.0 7.28052    
cufflinks 4.34354 0.0 12.7217    
cufflinks 0.405607 0.0 1.52421 Low Low
cufflinks 4.03507 0.0 12.0866    
cufflinks 2.40279 0.0 7.63472    
cufflinks 0.503539 0.0 1.85906 Low Low
cufflinks 24.3331 0.0 62.9241   High
cufflinks 29.7009 0.0 76.859 High High
cufflinks 32.6067 0.0 84.3871 High High
cufflinks 21.3204 0.0 55.3241    
cufflinks 1.0426 0.0 3.62264    

0 Strain